Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RAB40AQ8WXH6 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
RAB40AQ8WXH6 AC068880.1-201ENST00000507289 2297 ntBASIC16.62■□□□□ 0.25
RAB40AQ8WXH6 AP000997.3-201ENST00000623333 2250 ntBASIC16.62■□□□□ 0.25
RAB40AQ8WXH6 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAB40AQ8WXH6 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAB40AQ8WXH6 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAB40AQ8WXH6 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
RAB40AQ8WXH6 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RAB40AQ8WXH6 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
RAB40AQ8WXH6 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC16.61■□□□□ 0.25
RAB40AQ8WXH6 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RAB40AQ8WXH6 AC018553.1-201ENST00000616682 1458 ntBASIC16.61■□□□□ 0.25
RAB40AQ8WXH6 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RAB40AQ8WXH6 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC16.61■□□□□ 0.25
RAB40AQ8WXH6 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
RAB40AQ8WXH6 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RAB40AQ8WXH6 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RAB40AQ8WXH6 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RAB40AQ8WXH6 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC16.61■□□□□ 0.25
RAB40AQ8WXH6 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC16.61■□□□□ 0.25
RAB40AQ8WXH6 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC16.61■□□□□ 0.25
RAB40AQ8WXH6 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RAB40AQ8WXH6 AP006294.2-201ENST00000641667 209 ntBASIC16.61■□□□□ 0.25
RAB40AQ8WXH6 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC16.61■□□□□ 0.25
RAB40AQ8WXH6 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC16.61■□□□□ 0.25
RAB40AQ8WXH6 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RAB40AQ8WXH6 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
RAB40AQ8WXH6 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC16.61■□□□□ 0.25
RAB40AQ8WXH6 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC16.61■□□□□ 0.25
RAB40AQ8WXH6 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RAB40AQ8WXH6 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
RAB40AQ8WXH6 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
RAB40AQ8WXH6 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
RAB40AQ8WXH6 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC16.61■□□□□ 0.25
RAB40AQ8WXH6 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC16.6■□□□□ 0.25
RAB40AQ8WXH6 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAB40AQ8WXH6 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAB40AQ8WXH6 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAB40AQ8WXH6 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAB40AQ8WXH6 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC16.6■□□□□ 0.25
RAB40AQ8WXH6 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RAB40AQ8WXH6 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAB40AQ8WXH6 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
RAB40AQ8WXH6 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.6■□□□□ 0.25
RAB40AQ8WXH6 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAB40AQ8WXH6 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAB40AQ8WXH6 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC16.6■□□□□ 0.25
RAB40AQ8WXH6 RPS2P52-201ENST00000469610 820 ntBASIC16.6■□□□□ 0.25
RAB40AQ8WXH6 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC16.6■□□□□ 0.25
RAB40AQ8WXH6 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
RAB40AQ8WXH6 RN7SL471P-201ENST00000580476 299 ntBASIC16.6■□□□□ 0.25
RAB40AQ8WXH6 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC16.6■□□□□ 0.25
RAB40AQ8WXH6 AC069544.1-201ENST00000609399 999 ntBASIC16.6■□□□□ 0.25
RAB40AQ8WXH6 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
RAB40AQ8WXH6 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC16.6■□□□□ 0.25
RAB40AQ8WXH6 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RAB40AQ8WXH6 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RAB40AQ8WXH6 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RAB40AQ8WXH6 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RAB40AQ8WXH6 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
RAB40AQ8WXH6 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RAB40AQ8WXH6 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAB40AQ8WXH6 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC16.6■□□□□ 0.25
RAB40AQ8WXH6 AC116351.2-201ENST00000606540 1585 ntBASIC16.6■□□□□ 0.25
RAB40AQ8WXH6 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAB40AQ8WXH6 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAB40AQ8WXH6 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAB40AQ8WXH6 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC16.59■□□□□ 0.25
RAB40AQ8WXH6 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAB40AQ8WXH6 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC16.59■□□□□ 0.25
RAB40AQ8WXH6 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC16.59■□□□□ 0.25
RAB40AQ8WXH6 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC16.59■□□□□ 0.25
RAB40AQ8WXH6 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAB40AQ8WXH6 PODN-203ENST00000395871 2744 ntTSL 5 BASIC16.59■□□□□ 0.25
RAB40AQ8WXH6 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAB40AQ8WXH6 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAB40AQ8WXH6 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAB40AQ8WXH6 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
RAB40AQ8WXH6 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC16.59■□□□□ 0.25
RAB40AQ8WXH6 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
RAB40AQ8WXH6 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
RAB40AQ8WXH6 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RAB40AQ8WXH6 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC16.59■□□□□ 0.25
RAB40AQ8WXH6 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
RAB40AQ8WXH6 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RAB40AQ8WXH6 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC16.59■□□□□ 0.25
RAB40AQ8WXH6 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RAB40AQ8WXH6 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
RAB40AQ8WXH6 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC16.59■□□□□ 0.25
RAB40AQ8WXH6 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC16.59■□□□□ 0.25
RAB40AQ8WXH6 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
RAB40AQ8WXH6 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC16.59■□□□□ 0.25
RAB40AQ8WXH6 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAB40AQ8WXH6 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAB40AQ8WXH6 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAB40AQ8WXH6 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
RAB40AQ8WXH6 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
RAB40AQ8WXH6 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
RAB40AQ8WXH6 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC16.58■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms