Protein–RNA interactions for Protein: Q8TBE1

CNIH3, Protein cornichon homolog 3, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH3Q8TBE1 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CNIH3Q8TBE1 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CNIH3Q8TBE1 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
CNIH3Q8TBE1 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CNIH3Q8TBE1 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
CNIH3Q8TBE1 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.27■□□□□ 0.35
CNIH3Q8TBE1 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
CNIH3Q8TBE1 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC17.27■□□□□ 0.35
CNIH3Q8TBE1 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC17.27■□□□□ 0.35
CNIH3Q8TBE1 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.35
CNIH3Q8TBE1 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.27■□□□□ 0.35
CNIH3Q8TBE1 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CNIH3Q8TBE1 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.26■□□□□ 0.35
CNIH3Q8TBE1 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CNIH3Q8TBE1 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CNIH3Q8TBE1 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC17.26■□□□□ 0.35
CNIH3Q8TBE1 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CNIH3Q8TBE1 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CNIH3Q8TBE1 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CNIH3Q8TBE1 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CNIH3Q8TBE1 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CNIH3Q8TBE1 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC17.26■□□□□ 0.35
CNIH3Q8TBE1 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC17.26■□□□□ 0.35
CNIH3Q8TBE1 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CNIH3Q8TBE1 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
CNIH3Q8TBE1 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CNIH3Q8TBE1 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC17.26■□□□□ 0.35
CNIH3Q8TBE1 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC17.26■□□□□ 0.35
CNIH3Q8TBE1 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
CNIH3Q8TBE1 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CNIH3Q8TBE1 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC17.26■□□□□ 0.35
CNIH3Q8TBE1 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
CNIH3Q8TBE1 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
CNIH3Q8TBE1 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC17.26■□□□□ 0.35
CNIH3Q8TBE1 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CNIH3Q8TBE1 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CNIH3Q8TBE1 GNAS-203ENST00000306120 1878 ntBASIC17.26■□□□□ 0.35
CNIH3Q8TBE1 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
CNIH3Q8TBE1 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
CNIH3Q8TBE1 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
CNIH3Q8TBE1 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CNIH3Q8TBE1 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CNIH3Q8TBE1 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CNIH3Q8TBE1 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.25■□□□□ 0.35
CNIH3Q8TBE1 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CNIH3Q8TBE1 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.25■□□□□ 0.35
CNIH3Q8TBE1 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.25■□□□□ 0.35
CNIH3Q8TBE1 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CNIH3Q8TBE1 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CNIH3Q8TBE1 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CNIH3Q8TBE1 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CNIH3Q8TBE1 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CNIH3Q8TBE1 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CNIH3Q8TBE1 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CNIH3Q8TBE1 CNN2P6-201ENST00000439038 900 ntBASIC17.25■□□□□ 0.35
CNIH3Q8TBE1 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
CNIH3Q8TBE1 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CNIH3Q8TBE1 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CNIH3Q8TBE1 GOLGA6L3-201ENST00000507199 1679 ntBASIC17.25■□□□□ 0.35
CNIH3Q8TBE1 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC17.25■□□□□ 0.35
CNIH3Q8TBE1 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
CNIH3Q8TBE1 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CNIH3Q8TBE1 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CNIH3Q8TBE1 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CNIH3Q8TBE1 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CNIH3Q8TBE1 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CNIH3Q8TBE1 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CNIH3Q8TBE1 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.24■□□□□ 0.35
CNIH3Q8TBE1 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
CNIH3Q8TBE1 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CNIH3Q8TBE1 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
CNIH3Q8TBE1 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CNIH3Q8TBE1 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CNIH3Q8TBE1 KRT8P8-201ENST00000434750 1448 ntBASIC17.24■□□□□ 0.35
CNIH3Q8TBE1 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.24■□□□□ 0.35
CNIH3Q8TBE1 PCDHA12-202ENST00000613593 2588 ntBASIC17.24■□□□□ 0.35
CNIH3Q8TBE1 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
CNIH3Q8TBE1 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CNIH3Q8TBE1 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CNIH3Q8TBE1 GUK1-205ENST00000366722 850 ntTSL 3 BASIC17.24■□□□□ 0.35
CNIH3Q8TBE1 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CNIH3Q8TBE1 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CNIH3Q8TBE1 HES2-205ENST00000487437 968 ntTSL 3 BASIC17.24■□□□□ 0.35
CNIH3Q8TBE1 SPI1-203ENST00000533030 661 ntTSL 2 BASIC17.24■□□□□ 0.35
CNIH3Q8TBE1 KRT17P1-201ENST00000399211 1546 ntBASIC17.24■□□□□ 0.35
CNIH3Q8TBE1 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.24■□□□□ 0.35
CNIH3Q8TBE1 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CNIH3Q8TBE1 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
CNIH3Q8TBE1 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CNIH3Q8TBE1 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CNIH3Q8TBE1 AC135776.1-201ENST00000319817 2481 ntBASIC17.24■□□□□ 0.35
CNIH3Q8TBE1 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CNIH3Q8TBE1 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CNIH3Q8TBE1 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CNIH3Q8TBE1 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CNIH3Q8TBE1 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CNIH3Q8TBE1 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
CNIH3Q8TBE1 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CNIH3Q8TBE1 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CNIH3Q8TBE1 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms