Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDH19Q8TAB3 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC19.51■□□□□ 0.71
PCDH19Q8TAB3 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.5■□□□□ 0.71
PCDH19Q8TAB3 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC19.5■□□□□ 0.71
PCDH19Q8TAB3 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDH19Q8TAB3 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDH19Q8TAB3 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PCDH19Q8TAB3 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDH19Q8TAB3 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC19.5■□□□□ 0.71
PCDH19Q8TAB3 HEIH-201ENST00000623091 1652 ntBASIC19.5■□□□□ 0.71
PCDH19Q8TAB3 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC19.5■□□□□ 0.71
PCDH19Q8TAB3 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDH19Q8TAB3 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC19.5■□□□□ 0.71
PCDH19Q8TAB3 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC19.5■□□□□ 0.71
PCDH19Q8TAB3 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDH19Q8TAB3 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC19.5■□□□□ 0.71
PCDH19Q8TAB3 REXO1L10P-201ENST00000615707 1290 ntBASIC19.5■□□□□ 0.71
PCDH19Q8TAB3 REXO1L12P-201ENST00000622156 912 ntBASIC19.5■□□□□ 0.71
PCDH19Q8TAB3 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDH19Q8TAB3 COBL-210ENST00000632460 1941 ntTSL 5 BASIC19.5■□□□□ 0.71
PCDH19Q8TAB3 ANO7L1-203ENST00000602586 1720 ntBASIC19.5■□□□□ 0.71
PCDH19Q8TAB3 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDH19Q8TAB3 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDH19Q8TAB3 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDH19Q8TAB3 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC19.5■□□□□ 0.71
PCDH19Q8TAB3 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDH19Q8TAB3 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PCDH19Q8TAB3 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC19.49■□□□□ 0.71
PCDH19Q8TAB3 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDH19Q8TAB3 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC19.49■□□□□ 0.71
PCDH19Q8TAB3 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC19.49■□□□□ 0.71
PCDH19Q8TAB3 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDH19Q8TAB3 KRT8P32-201ENST00000512863 1461 ntBASIC19.49■□□□□ 0.71
PCDH19Q8TAB3 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDH19Q8TAB3 WIZP1-201ENST00000531444 2299 ntBASIC19.49■□□□□ 0.71
PCDH19Q8TAB3 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDH19Q8TAB3 SNAI3-AS1-205ENST00000568633 2096 ntBASIC19.49■□□□□ 0.71
PCDH19Q8TAB3 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
PCDH19Q8TAB3 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDH19Q8TAB3 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC19.49■□□□□ 0.71
PCDH19Q8TAB3 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC19.49■□□□□ 0.71
PCDH19Q8TAB3 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDH19Q8TAB3 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC19.49■□□□□ 0.71
PCDH19Q8TAB3 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC19.49■□□□□ 0.71
PCDH19Q8TAB3 AC068587.9-201ENST00000641814 219 ntBASIC19.49■□□□□ 0.71
PCDH19Q8TAB3 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
PCDH19Q8TAB3 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDH19Q8TAB3 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDH19Q8TAB3 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC19.49■□□□□ 0.71
PCDH19Q8TAB3 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC19.49■□□□□ 0.71
PCDH19Q8TAB3 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDH19Q8TAB3 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDH19Q8TAB3 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDH19Q8TAB3 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC19.48■□□□□ 0.71
PCDH19Q8TAB3 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDH19Q8TAB3 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PCDH19Q8TAB3 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PCDH19Q8TAB3 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC19.48■□□□□ 0.71
PCDH19Q8TAB3 AC096733.2-201ENST00000609937 1394 ntBASIC19.48■□□□□ 0.71
PCDH19Q8TAB3 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDH19Q8TAB3 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
PCDH19Q8TAB3 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PCDH19Q8TAB3 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC19.48■□□□□ 0.71
PCDH19Q8TAB3 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC19.48■□□□□ 0.71
PCDH19Q8TAB3 BX088651.1-201ENST00000540551 451 ntBASIC19.48■□□□□ 0.71
PCDH19Q8TAB3 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC19.48■□□□□ 0.71
PCDH19Q8TAB3 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC19.48■□□□□ 0.71
PCDH19Q8TAB3 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDH19Q8TAB3 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC19.48■□□□□ 0.71
PCDH19Q8TAB3 DGCR10-201ENST00000609839 495 ntBASIC19.48■□□□□ 0.71
PCDH19Q8TAB3 NFYC-AS1-201ENST00000606277 1687 ntBASIC19.48■□□□□ 0.71
PCDH19Q8TAB3 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC19.48■□□□□ 0.71
PCDH19Q8TAB3 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC19.48■□□□□ 0.71
PCDH19Q8TAB3 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDH19Q8TAB3 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC19.48■□□□□ 0.71
PCDH19Q8TAB3 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDH19Q8TAB3 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC19.47■□□□□ 0.71
PCDH19Q8TAB3 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDH19Q8TAB3 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDH19Q8TAB3 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC19.47■□□□□ 0.71
PCDH19Q8TAB3 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDH19Q8TAB3 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDH19Q8TAB3 AC104581.1-202ENST00000635932 2618 ntBASIC19.47■□□□□ 0.71
PCDH19Q8TAB3 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC19.47■□□□□ 0.71
PCDH19Q8TAB3 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
PCDH19Q8TAB3 MTMR9LP-203ENST00000426597 1545 ntBASIC19.47■□□□□ 0.71
PCDH19Q8TAB3 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC19.47■□□□□ 0.71
PCDH19Q8TAB3 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PCDH19Q8TAB3 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDH19Q8TAB3 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PCDH19Q8TAB3 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDH19Q8TAB3 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
PCDH19Q8TAB3 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.47■□□□□ 0.71
PCDH19Q8TAB3 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC19.47■□□□□ 0.71
PCDH19Q8TAB3 ECEL1P3-201ENST00000427961 737 ntBASIC19.47■□□□□ 0.71
PCDH19Q8TAB3 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC19.47■□□□□ 0.71
PCDH19Q8TAB3 AC026471.5-201ENST00000615068 467 ntBASIC19.47■□□□□ 0.71
PCDH19Q8TAB3 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
PCDH19Q8TAB3 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDH19Q8TAB3 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms