Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
LINC01006Q8NI28 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
LINC01006Q8NI28 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC14.69□□□□□ -0.06
LINC01006Q8NI28 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LINC01006Q8NI28 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
LINC01006Q8NI28 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
LINC01006Q8NI28 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
LINC01006Q8NI28 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC14.69□□□□□ -0.06
LINC01006Q8NI28 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LINC01006Q8NI28 RCC2P3-201ENST00000418112 1537 ntBASIC14.69□□□□□ -0.06
LINC01006Q8NI28 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LINC01006Q8NI28 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
LINC01006Q8NI28 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LINC01006Q8NI28 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC14.69□□□□□ -0.06
LINC01006Q8NI28 AL512353.2-201ENST00000448759 1962 ntBASIC14.69□□□□□ -0.06
LINC01006Q8NI28 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LINC01006Q8NI28 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
LINC01006Q8NI28 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
LINC01006Q8NI28 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
LINC01006Q8NI28 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LINC01006Q8NI28 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LINC01006Q8NI28 KRT18P1-202ENST00000452408 1331 ntBASIC14.68□□□□□ -0.06
LINC01006Q8NI28 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC14.68□□□□□ -0.06
LINC01006Q8NI28 AC008556.1-201ENST00000610908 2040 ntBASIC14.68□□□□□ -0.06
LINC01006Q8NI28 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC14.68□□□□□ -0.06
LINC01006Q8NI28 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC14.68□□□□□ -0.06
LINC01006Q8NI28 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC14.68□□□□□ -0.06
LINC01006Q8NI28 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC14.68□□□□□ -0.06
LINC01006Q8NI28 AC004870.1-201ENST00000315132 882 ntBASIC14.68□□□□□ -0.06
LINC01006Q8NI28 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LINC01006Q8NI28 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
LINC01006Q8NI28 AL845331.1-201ENST00000424978 1190 ntBASIC14.68□□□□□ -0.06
LINC01006Q8NI28 KRT18P23-201ENST00000435622 1283 ntBASIC14.68□□□□□ -0.06
LINC01006Q8NI28 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC14.68□□□□□ -0.06
LINC01006Q8NI28 NUS1P1-201ENST00000446295 882 ntBASIC14.68□□□□□ -0.06
LINC01006Q8NI28 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC14.68□□□□□ -0.06
LINC01006Q8NI28 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC14.68□□□□□ -0.06
LINC01006Q8NI28 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
LINC01006Q8NI28 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC14.68□□□□□ -0.06
LINC01006Q8NI28 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
LINC01006Q8NI28 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC14.68□□□□□ -0.06
LINC01006Q8NI28 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
LINC01006Q8NI28 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LINC01006Q8NI28 PWWP2AP1-201ENST00000429776 2273 ntBASIC14.68□□□□□ -0.06
LINC01006Q8NI28 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LINC01006Q8NI28 KATNBL1P6-202ENST00000562413 1466 ntBASIC14.68□□□□□ -0.06
LINC01006Q8NI28 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
LINC01006Q8NI28 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LINC01006Q8NI28 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC14.68□□□□□ -0.06
LINC01006Q8NI28 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
LINC01006Q8NI28 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
LINC01006Q8NI28 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LINC01006Q8NI28 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
LINC01006Q8NI28 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
LINC01006Q8NI28 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LINC01006Q8NI28 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
LINC01006Q8NI28 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC14.67□□□□□ -0.06
LINC01006Q8NI28 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC14.67□□□□□ -0.06
LINC01006Q8NI28 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LINC01006Q8NI28 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LINC01006Q8NI28 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LINC01006Q8NI28 AC246785.2-201ENST00000432512 513 ntBASIC14.67□□□□□ -0.06
LINC01006Q8NI28 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC14.67□□□□□ -0.06
LINC01006Q8NI28 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC14.67□□□□□ -0.06
LINC01006Q8NI28 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC14.67□□□□□ -0.06
LINC01006Q8NI28 AC104390.1-201ENST00000555663 520 ntBASIC14.67□□□□□ -0.06
LINC01006Q8NI28 KLK8-205ENST00000593490 267 ntTSL 3 BASIC14.67□□□□□ -0.06
LINC01006Q8NI28 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC14.67□□□□□ -0.06
LINC01006Q8NI28 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC14.67□□□□□ -0.06
LINC01006Q8NI28 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC14.67□□□□□ -0.06
LINC01006Q8NI28 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LINC01006Q8NI28 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
LINC01006Q8NI28 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
LINC01006Q8NI28 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC14.67□□□□□ -0.06
LINC01006Q8NI28 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
LINC01006Q8NI28 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LINC01006Q8NI28 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LINC01006Q8NI28 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC14.66□□□□□ -0.06
LINC01006Q8NI28 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
LINC01006Q8NI28 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
LINC01006Q8NI28 HOXB1-202ENST00000577092 1414 ntBASIC14.66□□□□□ -0.06
LINC01006Q8NI28 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LINC01006Q8NI28 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC14.66□□□□□ -0.06
LINC01006Q8NI28 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC14.66□□□□□ -0.06
LINC01006Q8NI28 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LINC01006Q8NI28 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
LINC01006Q8NI28 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
LINC01006Q8NI28 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC14.66□□□□□ -0.06
LINC01006Q8NI28 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LINC01006Q8NI28 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC14.66□□□□□ -0.06
LINC01006Q8NI28 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
LINC01006Q8NI28 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC14.66□□□□□ -0.06
LINC01006Q8NI28 TEX21P-204ENST00000641479 1693 ntBASIC14.66□□□□□ -0.06
LINC01006Q8NI28 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC14.66□□□□□ -0.06
LINC01006Q8NI28 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LINC01006Q8NI28 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LINC01006Q8NI28 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
LINC01006Q8NI28 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LINC01006Q8NI28 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LINC01006Q8NI28 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms