Protein–RNA interactions for Protein: Q8NHY2

RFWD2, E3 ubiquitin-protein ligase RFWD2, humanhuman

Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2Q8NHY2 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RFWD2Q8NHY2 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
RFWD2Q8NHY2 METTL26-203ENST00000397664 604 ntTSL 2 BASIC18.68■□□□□ 0.58
RFWD2Q8NHY2 CYP2T1P-201ENST00000432607 1285 ntBASIC18.68■□□□□ 0.58
RFWD2Q8NHY2 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC18.68■□□□□ 0.58
RFWD2Q8NHY2 DLX3-202ENST00000512495 834 ntTSL 2 BASIC18.68■□□□□ 0.58
RFWD2Q8NHY2 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC18.68■□□□□ 0.58
RFWD2Q8NHY2 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC18.68■□□□□ 0.58
RFWD2Q8NHY2 AC008694.1-202ENST00000636953 945 ntBASIC18.68■□□□□ 0.58
RFWD2Q8NHY2 AC073111.5-205ENST00000641717 521 ntBASIC18.68■□□□□ 0.58
RFWD2Q8NHY2 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.68■□□□□ 0.58
RFWD2Q8NHY2 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RFWD2Q8NHY2 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RFWD2Q8NHY2 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.68■□□□□ 0.58
RFWD2Q8NHY2 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
RFWD2Q8NHY2 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RFWD2Q8NHY2 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RFWD2Q8NHY2 MKRN4P-201ENST00000444706 1521 ntBASIC18.68■□□□□ 0.58
RFWD2Q8NHY2 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC18.68■□□□□ 0.58
RFWD2Q8NHY2 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RFWD2Q8NHY2 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RFWD2Q8NHY2 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC18.68■□□□□ 0.58
RFWD2Q8NHY2 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RFWD2Q8NHY2 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC18.67■□□□□ 0.58
RFWD2Q8NHY2 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
RFWD2Q8NHY2 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC18.67■□□□□ 0.58
RFWD2Q8NHY2 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RFWD2Q8NHY2 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC18.67■□□□□ 0.58
RFWD2Q8NHY2 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
RFWD2Q8NHY2 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC18.67■□□□□ 0.58
RFWD2Q8NHY2 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RFWD2Q8NHY2 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
RFWD2Q8NHY2 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RFWD2Q8NHY2 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC18.67■□□□□ 0.58
RFWD2Q8NHY2 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RFWD2Q8NHY2 BET1L-204ENST00000410108 637 ntTSL 3 BASIC18.67■□□□□ 0.58
RFWD2Q8NHY2 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RFWD2Q8NHY2 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC18.67■□□□□ 0.58
RFWD2Q8NHY2 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC18.67■□□□□ 0.58
RFWD2Q8NHY2 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC18.67■□□□□ 0.58
RFWD2Q8NHY2 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC18.67■□□□□ 0.58
RFWD2Q8NHY2 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC18.67■□□□□ 0.58
RFWD2Q8NHY2 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC18.67■□□□□ 0.58
RFWD2Q8NHY2 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RFWD2Q8NHY2 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RFWD2Q8NHY2 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RFWD2Q8NHY2 NXN-202ENST00000537628 1340 ntTSL 3 BASIC18.67■□□□□ 0.58
RFWD2Q8NHY2 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RFWD2Q8NHY2 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RFWD2Q8NHY2 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
RFWD2Q8NHY2 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
RFWD2Q8NHY2 AC010980.2-201ENST00000587099 1412 ntBASIC18.66■□□□□ 0.58
RFWD2Q8NHY2 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
RFWD2Q8NHY2 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
RFWD2Q8NHY2 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
RFWD2Q8NHY2 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC18.66■□□□□ 0.58
RFWD2Q8NHY2 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
RFWD2Q8NHY2 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
RFWD2Q8NHY2 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RFWD2Q8NHY2 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RFWD2Q8NHY2 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RFWD2Q8NHY2 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
RFWD2Q8NHY2 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
RFWD2Q8NHY2 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RFWD2Q8NHY2 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC18.66■□□□□ 0.58
RFWD2Q8NHY2 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC18.66■□□□□ 0.58
RFWD2Q8NHY2 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
RFWD2Q8NHY2 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC18.66■□□□□ 0.58
RFWD2Q8NHY2 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RFWD2Q8NHY2 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RFWD2Q8NHY2 AC069236.1-201ENST00000604339 616 ntBASIC18.66■□□□□ 0.58
RFWD2Q8NHY2 AC005181.1-201ENST00000604782 1256 ntBASIC18.66■□□□□ 0.58
RFWD2Q8NHY2 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
RFWD2Q8NHY2 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RFWD2Q8NHY2 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RFWD2Q8NHY2 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RFWD2Q8NHY2 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RFWD2Q8NHY2 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
RFWD2Q8NHY2 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RFWD2Q8NHY2 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RFWD2Q8NHY2 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
RFWD2Q8NHY2 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RFWD2Q8NHY2 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RFWD2Q8NHY2 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RFWD2Q8NHY2 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
RFWD2Q8NHY2 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RFWD2Q8NHY2 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.66■□□□□ 0.58
RFWD2Q8NHY2 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.65■□□□□ 0.58
RFWD2Q8NHY2 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
RFWD2Q8NHY2 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
RFWD2Q8NHY2 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
RFWD2Q8NHY2 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
RFWD2Q8NHY2 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
RFWD2Q8NHY2 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RFWD2Q8NHY2 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
RFWD2Q8NHY2 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
RFWD2Q8NHY2 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RFWD2Q8NHY2 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RFWD2Q8NHY2 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC18.65■□□□□ 0.58
RFWD2Q8NHY2 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms