Protein–RNA interactions for Protein: Q8NF37

LPCAT1, Lysophosphatidylcholine acyltransferase 1, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1Q8NF37 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LPCAT1Q8NF37 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LPCAT1Q8NF37 CYP2D8P-201ENST00000433633 1490 ntBASIC19.06■□□□□ 0.64
LPCAT1Q8NF37 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LPCAT1Q8NF37 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
LPCAT1Q8NF37 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LPCAT1Q8NF37 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC19.06■□□□□ 0.64
LPCAT1Q8NF37 GXYLT1P3-201ENST00000453058 1193 ntBASIC19.06■□□□□ 0.64
LPCAT1Q8NF37 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC19.06■□□□□ 0.64
LPCAT1Q8NF37 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC19.06■□□□□ 0.64
LPCAT1Q8NF37 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC19.06■□□□□ 0.64
LPCAT1Q8NF37 C2orf69P3-201ENST00000565542 1120 ntBASIC19.06■□□□□ 0.64
LPCAT1Q8NF37 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC19.06■□□□□ 0.64
LPCAT1Q8NF37 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
LPCAT1Q8NF37 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LPCAT1Q8NF37 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC19.06■□□□□ 0.64
LPCAT1Q8NF37 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
LPCAT1Q8NF37 AC018445.3-201ENST00000624177 1945 ntBASIC19.06■□□□□ 0.64
LPCAT1Q8NF37 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.05■□□□□ 0.64
LPCAT1Q8NF37 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
LPCAT1Q8NF37 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC19.05■□□□□ 0.64
LPCAT1Q8NF37 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
LPCAT1Q8NF37 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
LPCAT1Q8NF37 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
LPCAT1Q8NF37 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
LPCAT1Q8NF37 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC19.05■□□□□ 0.64
LPCAT1Q8NF37 NAPSB-206ENST00000562112 1266 ntBASIC19.05■□□□□ 0.64
LPCAT1Q8NF37 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LPCAT1Q8NF37 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC19.05■□□□□ 0.64
LPCAT1Q8NF37 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC19.05■□□□□ 0.64
LPCAT1Q8NF37 USP39-202ENST00000409025 1946 ntTSL 5 BASIC19.05■□□□□ 0.64
LPCAT1Q8NF37 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
LPCAT1Q8NF37 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
LPCAT1Q8NF37 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
LPCAT1Q8NF37 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
LPCAT1Q8NF37 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC19.05■□□□□ 0.64
LPCAT1Q8NF37 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
LPCAT1Q8NF37 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LPCAT1Q8NF37 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LPCAT1Q8NF37 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.04■□□□□ 0.64
LPCAT1Q8NF37 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
LPCAT1Q8NF37 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC19.04■□□□□ 0.64
LPCAT1Q8NF37 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
LPCAT1Q8NF37 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
LPCAT1Q8NF37 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC19.04■□□□□ 0.64
LPCAT1Q8NF37 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LPCAT1Q8NF37 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
LPCAT1Q8NF37 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LPCAT1Q8NF37 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
LPCAT1Q8NF37 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LPCAT1Q8NF37 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
LPCAT1Q8NF37 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LPCAT1Q8NF37 AC087499.1-201ENST00000418141 1075 ntBASIC19.04■□□□□ 0.64
LPCAT1Q8NF37 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.04■□□□□ 0.64
LPCAT1Q8NF37 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
LPCAT1Q8NF37 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC19.04■□□□□ 0.64
LPCAT1Q8NF37 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
LPCAT1Q8NF37 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
LPCAT1Q8NF37 KRT8P3-201ENST00000519669 1449 ntBASIC19.04■□□□□ 0.64
LPCAT1Q8NF37 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC19.04■□□□□ 0.64
LPCAT1Q8NF37 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
LPCAT1Q8NF37 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC19.04■□□□□ 0.64
LPCAT1Q8NF37 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
LPCAT1Q8NF37 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LPCAT1Q8NF37 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC19.04■□□□□ 0.64
LPCAT1Q8NF37 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC19.04■□□□□ 0.64
LPCAT1Q8NF37 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.04■□□□□ 0.64
LPCAT1Q8NF37 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
LPCAT1Q8NF37 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
LPCAT1Q8NF37 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
LPCAT1Q8NF37 TBC1D3P2-202ENST00000577902 1649 ntBASIC19.03■□□□□ 0.64
LPCAT1Q8NF37 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LPCAT1Q8NF37 AC098818.2-201ENST00000564925 2320 ntBASIC19.03■□□□□ 0.64
LPCAT1Q8NF37 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LPCAT1Q8NF37 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LPCAT1Q8NF37 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
LPCAT1Q8NF37 AC138932.1-201ENST00000534164 6830 ntBASIC19.03■□□□□ 0.64
LPCAT1Q8NF37 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC19.03■□□□□ 0.64
LPCAT1Q8NF37 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC19.03■□□□□ 0.64
LPCAT1Q8NF37 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC19.03■□□□□ 0.64
LPCAT1Q8NF37 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC19.03■□□□□ 0.64
LPCAT1Q8NF37 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC19.03■□□□□ 0.64
LPCAT1Q8NF37 AC010947.1-201ENST00000623454 693 ntBASIC19.03■□□□□ 0.64
LPCAT1Q8NF37 AC073912.3-201ENST00000624414 853 ntBASIC19.03■□□□□ 0.64
LPCAT1Q8NF37 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LPCAT1Q8NF37 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LPCAT1Q8NF37 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LPCAT1Q8NF37 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
LPCAT1Q8NF37 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC19.03■□□□□ 0.64
LPCAT1Q8NF37 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC19.03■□□□□ 0.64
LPCAT1Q8NF37 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC19.03■□□□□ 0.64
LPCAT1Q8NF37 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
LPCAT1Q8NF37 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
LPCAT1Q8NF37 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
LPCAT1Q8NF37 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC19.02■□□□□ 0.64
LPCAT1Q8NF37 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
LPCAT1Q8NF37 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.02■□□□□ 0.64
LPCAT1Q8NF37 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LPCAT1Q8NF37 BUB3-202ENST00000368859 667 ntTSL 3 BASIC19.02■□□□□ 0.64
LPCAT1Q8NF37 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC19.02■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 114.3 ms