Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC18.04■□□□□ 0.48
SRFBP1Q8NEF9 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC18.04■□□□□ 0.48
SRFBP1Q8NEF9 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SRFBP1Q8NEF9 MFAP1P1-201ENST00000442257 1255 ntBASIC18.04■□□□□ 0.48
SRFBP1Q8NEF9 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
SRFBP1Q8NEF9 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC18.04■□□□□ 0.48
SRFBP1Q8NEF9 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC18.04■□□□□ 0.48
SRFBP1Q8NEF9 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SRFBP1Q8NEF9 AP005242.2-201ENST00000580065 1175 ntBASIC18.04■□□□□ 0.48
SRFBP1Q8NEF9 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC18.04■□□□□ 0.48
SRFBP1Q8NEF9 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC18.04■□□□□ 0.48
SRFBP1Q8NEF9 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SRFBP1Q8NEF9 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.04■□□□□ 0.48
SRFBP1Q8NEF9 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SRFBP1Q8NEF9 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SRFBP1Q8NEF9 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SRFBP1Q8NEF9 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SRFBP1Q8NEF9 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SRFBP1Q8NEF9 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SRFBP1Q8NEF9 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
SRFBP1Q8NEF9 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
SRFBP1Q8NEF9 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
SRFBP1Q8NEF9 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SRFBP1Q8NEF9 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SRFBP1Q8NEF9 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SRFBP1Q8NEF9 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC18.03■□□□□ 0.48
SRFBP1Q8NEF9 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
SRFBP1Q8NEF9 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
SRFBP1Q8NEF9 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SRFBP1Q8NEF9 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
SRFBP1Q8NEF9 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
SRFBP1Q8NEF9 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.03■□□□□ 0.48
SRFBP1Q8NEF9 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
SRFBP1Q8NEF9 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
SRFBP1Q8NEF9 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SRFBP1Q8NEF9 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SRFBP1Q8NEF9 CA15P1-201ENST00000481698 905 ntBASIC18.03■□□□□ 0.48
SRFBP1Q8NEF9 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC18.03■□□□□ 0.48
SRFBP1Q8NEF9 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
SRFBP1Q8NEF9 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SRFBP1Q8NEF9 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SRFBP1Q8NEF9 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SRFBP1Q8NEF9 AL049812.1-201ENST00000432563 2267 ntBASIC18.03■□□□□ 0.48
SRFBP1Q8NEF9 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC18.03■□□□□ 0.48
SRFBP1Q8NEF9 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
SRFBP1Q8NEF9 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SRFBP1Q8NEF9 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SRFBP1Q8NEF9 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC18.03■□□□□ 0.48
SRFBP1Q8NEF9 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.02■□□□□ 0.48
SRFBP1Q8NEF9 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SRFBP1Q8NEF9 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC18.02■□□□□ 0.48
SRFBP1Q8NEF9 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
SRFBP1Q8NEF9 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
SRFBP1Q8NEF9 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC18.02■□□□□ 0.48
SRFBP1Q8NEF9 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SRFBP1Q8NEF9 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
SRFBP1Q8NEF9 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC18.02■□□□□ 0.48
SRFBP1Q8NEF9 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC18.02■□□□□ 0.48
SRFBP1Q8NEF9 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SRFBP1Q8NEF9 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
SRFBP1Q8NEF9 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SRFBP1Q8NEF9 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SRFBP1Q8NEF9 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
SRFBP1Q8NEF9 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC18.02■□□□□ 0.48
SRFBP1Q8NEF9 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC18.02■□□□□ 0.48
SRFBP1Q8NEF9 CRYGFP-201ENST00000418459 633 ntBASIC18.02■□□□□ 0.48
SRFBP1Q8NEF9 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC18.02■□□□□ 0.48
SRFBP1Q8NEF9 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC18.02■□□□□ 0.48
SRFBP1Q8NEF9 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SRFBP1Q8NEF9 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.02■□□□□ 0.47
SRFBP1Q8NEF9 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
SRFBP1Q8NEF9 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
SRFBP1Q8NEF9 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
SRFBP1Q8NEF9 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
SRFBP1Q8NEF9 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SRFBP1Q8NEF9 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
SRFBP1Q8NEF9 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
SRFBP1Q8NEF9 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SRFBP1Q8NEF9 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
SRFBP1Q8NEF9 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
SRFBP1Q8NEF9 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
SRFBP1Q8NEF9 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
SRFBP1Q8NEF9 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SRFBP1Q8NEF9 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
SRFBP1Q8NEF9 RBM17P1-201ENST00000453646 1190 ntBASIC18.01■□□□□ 0.47
SRFBP1Q8NEF9 AC093827.2-201ENST00000512654 315 ntBASIC18.01■□□□□ 0.47
SRFBP1Q8NEF9 SNX21-213ENST00000614929 587 ntTSL 5 BASIC18.01■□□□□ 0.47
SRFBP1Q8NEF9 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SRFBP1Q8NEF9 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SRFBP1Q8NEF9 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.01■□□□□ 0.47
SRFBP1Q8NEF9 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
SRFBP1Q8NEF9 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
SRFBP1Q8NEF9 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.01■□□□□ 0.47
SRFBP1Q8NEF9 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SRFBP1Q8NEF9 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SRFBP1Q8NEF9 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
SRFBP1Q8NEF9 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC18.01■□□□□ 0.47
SRFBP1Q8NEF9 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC18.01■□□□□ 0.47
SRFBP1Q8NEF9 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SRFBP1Q8NEF9 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms