Protein–RNA interactions for Protein: Q8NCU1

CCDC197, Putative uncharacterized protein CCDC197, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197Q8NCU1 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC18.77■□□□□ 0.6
CCDC197Q8NCU1 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC197Q8NCU1 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC197Q8NCU1 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC197Q8NCU1 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC197Q8NCU1 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC197Q8NCU1 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC197Q8NCU1 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC197Q8NCU1 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC197Q8NCU1 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.59
CCDC197Q8NCU1 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.59
CCDC197Q8NCU1 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
CCDC197Q8NCU1 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
CCDC197Q8NCU1 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC18.76■□□□□ 0.59
CCDC197Q8NCU1 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC197Q8NCU1 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC197Q8NCU1 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC197Q8NCU1 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC197Q8NCU1 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC18.76■□□□□ 0.59
CCDC197Q8NCU1 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC197Q8NCU1 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC197Q8NCU1 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC18.76■□□□□ 0.59
CCDC197Q8NCU1 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC18.76■□□□□ 0.59
CCDC197Q8NCU1 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC197Q8NCU1 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC197Q8NCU1 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC197Q8NCU1 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC18.76■□□□□ 0.59
CCDC197Q8NCU1 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC18.76■□□□□ 0.59
CCDC197Q8NCU1 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC18.76■□□□□ 0.59
CCDC197Q8NCU1 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC197Q8NCU1 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC197Q8NCU1 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC18.76■□□□□ 0.59
CCDC197Q8NCU1 MAG-206ENST00000597035 542 ntTSL 4 BASIC18.76■□□□□ 0.59
CCDC197Q8NCU1 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC197Q8NCU1 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC197Q8NCU1 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
CCDC197Q8NCU1 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC197Q8NCU1 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC197Q8NCU1 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
CCDC197Q8NCU1 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC18.76■□□□□ 0.59
CCDC197Q8NCU1 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC18.76■□□□□ 0.59
CCDC197Q8NCU1 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC18.76■□□□□ 0.59
CCDC197Q8NCU1 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC18.76■□□□□ 0.59
CCDC197Q8NCU1 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC18.76■□□□□ 0.59
CCDC197Q8NCU1 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
CCDC197Q8NCU1 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC197Q8NCU1 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC197Q8NCU1 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC18.75■□□□□ 0.59
CCDC197Q8NCU1 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
CCDC197Q8NCU1 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
CCDC197Q8NCU1 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC18.75■□□□□ 0.59
CCDC197Q8NCU1 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC197Q8NCU1 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC18.75■□□□□ 0.59
CCDC197Q8NCU1 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC197Q8NCU1 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC197Q8NCU1 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC197Q8NCU1 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC18.75■□□□□ 0.59
CCDC197Q8NCU1 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC197Q8NCU1 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC197Q8NCU1 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC197Q8NCU1 EBPL-204ENST00000378272 766 ntTSL 3 BASIC18.75■□□□□ 0.59
CCDC197Q8NCU1 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC197Q8NCU1 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC197Q8NCU1 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC18.75■□□□□ 0.59
CCDC197Q8NCU1 AC023632.3-201ENST00000521633 145 ntBASIC18.75■□□□□ 0.59
CCDC197Q8NCU1 MFSD11-216ENST00000590393 1141 ntBASIC18.75■□□□□ 0.59
CCDC197Q8NCU1 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC18.75■□□□□ 0.59
CCDC197Q8NCU1 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC197Q8NCU1 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC18.75■□□□□ 0.59
CCDC197Q8NCU1 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC18.75■□□□□ 0.59
CCDC197Q8NCU1 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC18.75■□□□□ 0.59
CCDC197Q8NCU1 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC18.75■□□□□ 0.59
CCDC197Q8NCU1 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
CCDC197Q8NCU1 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC197Q8NCU1 ANKRD18DP-204ENST00000455355 1975 ntBASIC18.75■□□□□ 0.59
CCDC197Q8NCU1 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC197Q8NCU1 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC197Q8NCU1 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC18.75■□□□□ 0.59
CCDC197Q8NCU1 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC197Q8NCU1 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC18.74■□□□□ 0.59
CCDC197Q8NCU1 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC18.74■□□□□ 0.59
CCDC197Q8NCU1 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC197Q8NCU1 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC18.74■□□□□ 0.59
CCDC197Q8NCU1 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
CCDC197Q8NCU1 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC197Q8NCU1 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC197Q8NCU1 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
CCDC197Q8NCU1 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
CCDC197Q8NCU1 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC197Q8NCU1 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC18.74■□□□□ 0.59
CCDC197Q8NCU1 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
CCDC197Q8NCU1 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC18.74■□□□□ 0.59
CCDC197Q8NCU1 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC197Q8NCU1 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC18.74■□□□□ 0.59
CCDC197Q8NCU1 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC197Q8NCU1 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC18.74■□□□□ 0.59
CCDC197Q8NCU1 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC18.74■□□□□ 0.59
CCDC197Q8NCU1 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC18.74■□□□□ 0.59
CCDC197Q8NCU1 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC197Q8NCU1 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms