Protein–RNA interactions for Protein: Q8N8U3

RTL3, Retrotransposon Gag-like protein 3, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3Q8N8U3 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RTL3Q8N8U3 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC19.37■□□□□ 0.69
RTL3Q8N8U3 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC19.37■□□□□ 0.69
RTL3Q8N8U3 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
RTL3Q8N8U3 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC19.37■□□□□ 0.69
RTL3Q8N8U3 LINC01568-207ENST00000641790 1380 ntBASIC19.37■□□□□ 0.69
RTL3Q8N8U3 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RTL3Q8N8U3 INGX-201ENST00000359239 846 ntBASIC19.37■□□□□ 0.69
RTL3Q8N8U3 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RTL3Q8N8U3 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
RTL3Q8N8U3 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC19.37■□□□□ 0.69
RTL3Q8N8U3 AC128688.1-201ENST00000487626 519 ntBASIC19.37■□□□□ 0.69
RTL3Q8N8U3 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC19.37■□□□□ 0.69
RTL3Q8N8U3 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
RTL3Q8N8U3 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC19.37■□□□□ 0.69
RTL3Q8N8U3 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC19.37■□□□□ 0.69
RTL3Q8N8U3 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RTL3Q8N8U3 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RTL3Q8N8U3 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
RTL3Q8N8U3 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
RTL3Q8N8U3 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC19.37■□□□□ 0.69
RTL3Q8N8U3 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RTL3Q8N8U3 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RTL3Q8N8U3 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RTL3Q8N8U3 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
RTL3Q8N8U3 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RTL3Q8N8U3 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.36■□□□□ 0.69
RTL3Q8N8U3 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
RTL3Q8N8U3 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
RTL3Q8N8U3 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.36■□□□□ 0.69
RTL3Q8N8U3 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.36■□□□□ 0.69
RTL3Q8N8U3 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RTL3Q8N8U3 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
RTL3Q8N8U3 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RTL3Q8N8U3 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC19.36■□□□□ 0.69
RTL3Q8N8U3 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RTL3Q8N8U3 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RTL3Q8N8U3 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RTL3Q8N8U3 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
RTL3Q8N8U3 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC19.36■□□□□ 0.69
RTL3Q8N8U3 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC19.36■□□□□ 0.69
RTL3Q8N8U3 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
RTL3Q8N8U3 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC19.36■□□□□ 0.69
RTL3Q8N8U3 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC19.36■□□□□ 0.69
RTL3Q8N8U3 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC19.36■□□□□ 0.69
RTL3Q8N8U3 AP003041.3-201ENST00000527151 707 ntBASIC19.36■□□□□ 0.69
RTL3Q8N8U3 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC19.36■□□□□ 0.69
RTL3Q8N8U3 MIR4674-201ENST00000582457 87 ntBASIC19.36■□□□□ 0.69
RTL3Q8N8U3 AC145285.6-201ENST00000604632 637 ntBASIC19.36■□□□□ 0.69
RTL3Q8N8U3 AC010653.2-201ENST00000623505 997 ntBASIC19.36■□□□□ 0.69
RTL3Q8N8U3 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC19.36■□□□□ 0.69
RTL3Q8N8U3 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
RTL3Q8N8U3 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.36■□□□□ 0.69
RTL3Q8N8U3 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RTL3Q8N8U3 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RTL3Q8N8U3 GPAT2P1-201ENST00000444924 1672 ntBASIC19.36■□□□□ 0.69
RTL3Q8N8U3 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RTL3Q8N8U3 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC19.36■□□□□ 0.69
RTL3Q8N8U3 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
RTL3Q8N8U3 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
RTL3Q8N8U3 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.35■□□□□ 0.69
RTL3Q8N8U3 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
RTL3Q8N8U3 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC19.35■□□□□ 0.69
RTL3Q8N8U3 AC098818.2-201ENST00000564925 2320 ntBASIC19.35■□□□□ 0.69
RTL3Q8N8U3 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
RTL3Q8N8U3 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RTL3Q8N8U3 AIRN-201ENST00000601203 4374 ntBASIC19.35■□□□□ 0.69
RTL3Q8N8U3 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC19.35■□□□□ 0.69
RTL3Q8N8U3 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
RTL3Q8N8U3 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC19.35■□□□□ 0.69
RTL3Q8N8U3 AL023284.2-201ENST00000405850 579 ntBASIC19.35■□□□□ 0.69
RTL3Q8N8U3 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RTL3Q8N8U3 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC19.35■□□□□ 0.69
RTL3Q8N8U3 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC19.35■□□□□ 0.69
RTL3Q8N8U3 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC19.35■□□□□ 0.69
RTL3Q8N8U3 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
RTL3Q8N8U3 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RTL3Q8N8U3 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RTL3Q8N8U3 AC133561.5-201ENST00000635547 218 ntBASIC19.35■□□□□ 0.69
RTL3Q8N8U3 AC068587.9-201ENST00000641814 219 ntBASIC19.35■□□□□ 0.69
RTL3Q8N8U3 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RTL3Q8N8U3 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
RTL3Q8N8U3 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC19.35■□□□□ 0.69
RTL3Q8N8U3 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RTL3Q8N8U3 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RTL3Q8N8U3 RCC2P3-201ENST00000418112 1537 ntBASIC19.35■□□□□ 0.69
RTL3Q8N8U3 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
RTL3Q8N8U3 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RTL3Q8N8U3 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC19.35■□□□□ 0.69
RTL3Q8N8U3 AC138932.1-201ENST00000534164 6830 ntBASIC19.35■□□□□ 0.69
RTL3Q8N8U3 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.35■□□□□ 0.69
RTL3Q8N8U3 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RTL3Q8N8U3 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
RTL3Q8N8U3 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
RTL3Q8N8U3 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
RTL3Q8N8U3 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
RTL3Q8N8U3 HEIH-201ENST00000623091 1652 ntBASIC19.34■□□□□ 0.69
RTL3Q8N8U3 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
RTL3Q8N8U3 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC19.34■□□□□ 0.69
RTL3Q8N8U3 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms