Protein–RNA interactions for Protein: Q8N7P3

CLDN22, Claudin-22, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN22Q8N7P3 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLDN22Q8N7P3 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLDN22Q8N7P3 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLDN22Q8N7P3 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLDN22Q8N7P3 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.22■□□□□ 0.35
CLDN22Q8N7P3 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLDN22Q8N7P3 COBL-210ENST00000632460 1941 ntTSL 5 BASIC17.22■□□□□ 0.35
CLDN22Q8N7P3 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
CLDN22Q8N7P3 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLDN22Q8N7P3 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLDN22Q8N7P3 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLDN22Q8N7P3 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC17.22■□□□□ 0.35
CLDN22Q8N7P3 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLDN22Q8N7P3 F2R-202ENST00000505600 442 ntTSL 2 BASIC17.22■□□□□ 0.35
CLDN22Q8N7P3 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC17.22■□□□□ 0.35
CLDN22Q8N7P3 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CLDN22Q8N7P3 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CLDN22Q8N7P3 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLDN22Q8N7P3 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC17.22■□□□□ 0.35
CLDN22Q8N7P3 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CLDN22Q8N7P3 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLDN22Q8N7P3 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLDN22Q8N7P3 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLDN22Q8N7P3 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLDN22Q8N7P3 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLDN22Q8N7P3 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLDN22Q8N7P3 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
CLDN22Q8N7P3 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CLDN22Q8N7P3 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
CLDN22Q8N7P3 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CLDN22Q8N7P3 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.21■□□□□ 0.35
CLDN22Q8N7P3 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLDN22Q8N7P3 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLDN22Q8N7P3 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CLDN22Q8N7P3 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
CLDN22Q8N7P3 AC068880.1-201ENST00000507289 2297 ntBASIC17.21■□□□□ 0.35
CLDN22Q8N7P3 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CLDN22Q8N7P3 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
CLDN22Q8N7P3 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
CLDN22Q8N7P3 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLDN22Q8N7P3 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CLDN22Q8N7P3 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC17.21■□□□□ 0.35
CLDN22Q8N7P3 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLDN22Q8N7P3 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
CLDN22Q8N7P3 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC17.21■□□□□ 0.35
CLDN22Q8N7P3 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC17.21■□□□□ 0.35
CLDN22Q8N7P3 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC17.21■□□□□ 0.35
CLDN22Q8N7P3 KRT18P6-201ENST00000555540 1265 ntBASIC17.21■□□□□ 0.35
CLDN22Q8N7P3 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC17.21■□□□□ 0.35
CLDN22Q8N7P3 AC069544.1-201ENST00000609399 999 ntBASIC17.21■□□□□ 0.35
CLDN22Q8N7P3 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CLDN22Q8N7P3 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLDN22Q8N7P3 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLDN22Q8N7P3 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLDN22Q8N7P3 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLDN22Q8N7P3 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC17.21■□□□□ 0.35
CLDN22Q8N7P3 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLDN22Q8N7P3 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLDN22Q8N7P3 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
CLDN22Q8N7P3 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CLDN22Q8N7P3 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CLDN22Q8N7P3 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLDN22Q8N7P3 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLDN22Q8N7P3 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLDN22Q8N7P3 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLDN22Q8N7P3 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLDN22Q8N7P3 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.2■□□□□ 0.34
CLDN22Q8N7P3 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLDN22Q8N7P3 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC17.2■□□□□ 0.34
CLDN22Q8N7P3 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
CLDN22Q8N7P3 GOLGA6L5P-202ENST00000515341 1828 ntBASIC17.2■□□□□ 0.34
CLDN22Q8N7P3 AC073592.3-201ENST00000625118 1834 ntBASIC17.2■□□□□ 0.34
CLDN22Q8N7P3 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CLDN22Q8N7P3 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLDN22Q8N7P3 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC17.2■□□□□ 0.34
CLDN22Q8N7P3 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC17.2■□□□□ 0.34
CLDN22Q8N7P3 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLDN22Q8N7P3 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC17.2■□□□□ 0.34
CLDN22Q8N7P3 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC17.2■□□□□ 0.34
CLDN22Q8N7P3 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CLDN22Q8N7P3 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLDN22Q8N7P3 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CLDN22Q8N7P3 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
CLDN22Q8N7P3 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.2■□□□□ 0.34
CLDN22Q8N7P3 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC17.2■□□□□ 0.34
CLDN22Q8N7P3 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC17.2■□□□□ 0.34
CLDN22Q8N7P3 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLDN22Q8N7P3 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLDN22Q8N7P3 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CLDN22Q8N7P3 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CLDN22Q8N7P3 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLDN22Q8N7P3 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC17.2■□□□□ 0.34
CLDN22Q8N7P3 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLDN22Q8N7P3 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLDN22Q8N7P3 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CLDN22Q8N7P3 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLDN22Q8N7P3 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC17.19■□□□□ 0.34
CLDN22Q8N7P3 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLDN22Q8N7P3 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CLDN22Q8N7P3 TSPY23P-201ENST00000440136 739 ntBASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms