Protein–RNA interactions for Protein: Q8N7H5

PAF1, RNA polymerase II-associated factor 1 homolog, humanhuman

Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1Q8N7H5 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC19.41■□□□□ 0.7
PAF1Q8N7H5 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PAF1Q8N7H5 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PAF1Q8N7H5 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PAF1Q8N7H5 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
PAF1Q8N7H5 B3GAT3P1-201ENST00000471720 806 ntBASIC19.41■□□□□ 0.7
PAF1Q8N7H5 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC19.41■□□□□ 0.7
PAF1Q8N7H5 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC19.41■□□□□ 0.7
PAF1Q8N7H5 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PAF1Q8N7H5 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC19.41■□□□□ 0.7
PAF1Q8N7H5 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC19.41■□□□□ 0.7
PAF1Q8N7H5 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC19.41■□□□□ 0.7
PAF1Q8N7H5 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC19.41■□□□□ 0.7
PAF1Q8N7H5 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PAF1Q8N7H5 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC19.41■□□□□ 0.7
PAF1Q8N7H5 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PAF1Q8N7H5 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
PAF1Q8N7H5 AC104417.2-201ENST00000562989 1793 ntBASIC19.41■□□□□ 0.7
PAF1Q8N7H5 AC007952.6-201ENST00000573168 2673 ntBASIC19.41■□□□□ 0.7
PAF1Q8N7H5 AC003957.1-201ENST00000625108 2673 ntBASIC19.41■□□□□ 0.7
PAF1Q8N7H5 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
PAF1Q8N7H5 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PAF1Q8N7H5 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC19.41■□□□□ 0.7
PAF1Q8N7H5 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PAF1Q8N7H5 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PAF1Q8N7H5 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PAF1Q8N7H5 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
PAF1Q8N7H5 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
PAF1Q8N7H5 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PAF1Q8N7H5 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PAF1Q8N7H5 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PAF1Q8N7H5 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PAF1Q8N7H5 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PAF1Q8N7H5 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.4■□□□□ 0.7
PAF1Q8N7H5 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
PAF1Q8N7H5 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
PAF1Q8N7H5 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PAF1Q8N7H5 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PAF1Q8N7H5 CRYGFP-201ENST00000418459 633 ntBASIC19.4■□□□□ 0.7
PAF1Q8N7H5 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC19.4■□□□□ 0.7
PAF1Q8N7H5 AC011506.1-201ENST00000474329 610 ntBASIC19.4■□□□□ 0.7
PAF1Q8N7H5 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.4■□□□□ 0.7
PAF1Q8N7H5 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
PAF1Q8N7H5 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
PAF1Q8N7H5 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PAF1Q8N7H5 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
PAF1Q8N7H5 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC19.4■□□□□ 0.7
PAF1Q8N7H5 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
PAF1Q8N7H5 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.4■□□□□ 0.7
PAF1Q8N7H5 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
PAF1Q8N7H5 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
PAF1Q8N7H5 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
PAF1Q8N7H5 SDHAP1-207ENST00000440850 2000 ntBASIC19.39■□□□□ 0.69
PAF1Q8N7H5 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
PAF1Q8N7H5 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.39■□□□□ 0.69
PAF1Q8N7H5 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PAF1Q8N7H5 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC19.39■□□□□ 0.69
PAF1Q8N7H5 MIR1238-201ENST00000408483 83 ntBASIC19.39■□□□□ 0.69
PAF1Q8N7H5 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC19.39■□□□□ 0.69
PAF1Q8N7H5 AC097488.1-201ENST00000507834 756 ntBASIC19.39■□□□□ 0.69
PAF1Q8N7H5 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
PAF1Q8N7H5 AP000525.1-201ENST00000608286 694 ntBASIC19.39■□□□□ 0.69
PAF1Q8N7H5 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PAF1Q8N7H5 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PAF1Q8N7H5 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
PAF1Q8N7H5 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PAF1Q8N7H5 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC19.39■□□□□ 0.69
PAF1Q8N7H5 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PAF1Q8N7H5 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
PAF1Q8N7H5 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
PAF1Q8N7H5 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PAF1Q8N7H5 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
PAF1Q8N7H5 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
PAF1Q8N7H5 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PAF1Q8N7H5 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
PAF1Q8N7H5 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PAF1Q8N7H5 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PAF1Q8N7H5 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC19.38■□□□□ 0.69
PAF1Q8N7H5 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PAF1Q8N7H5 RBM17P1-201ENST00000453646 1190 ntBASIC19.38■□□□□ 0.69
PAF1Q8N7H5 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.38■□□□□ 0.69
PAF1Q8N7H5 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC19.38■□□□□ 0.69
PAF1Q8N7H5 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PAF1Q8N7H5 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PAF1Q8N7H5 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC19.38■□□□□ 0.69
PAF1Q8N7H5 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PAF1Q8N7H5 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC19.38■□□□□ 0.69
PAF1Q8N7H5 SNX21-213ENST00000614929 587 ntTSL 5 BASIC19.38■□□□□ 0.69
PAF1Q8N7H5 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC19.38■□□□□ 0.69
PAF1Q8N7H5 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PAF1Q8N7H5 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
PAF1Q8N7H5 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PAF1Q8N7H5 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PAF1Q8N7H5 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC19.37■□□□□ 0.69
PAF1Q8N7H5 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PAF1Q8N7H5 TP73-202ENST00000354437 2140 ntTSL 5 BASIC19.37■□□□□ 0.69
PAF1Q8N7H5 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PAF1Q8N7H5 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.37■□□□□ 0.69
PAF1Q8N7H5 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC19.37■□□□□ 0.69
PAF1Q8N7H5 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms