Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
TRAM1L1Q8N609 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TRAM1L1Q8N609 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC18.67■□□□□ 0.58
TRAM1L1Q8N609 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRAM1L1Q8N609 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
TRAM1L1Q8N609 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TRAM1L1Q8N609 AL109659.2-201ENST00000606809 1674 ntBASIC18.67■□□□□ 0.58
TRAM1L1Q8N609 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TRAM1L1Q8N609 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRAM1L1Q8N609 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TRAM1L1Q8N609 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRAM1L1Q8N609 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRAM1L1Q8N609 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
TRAM1L1Q8N609 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
TRAM1L1Q8N609 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC18.67■□□□□ 0.58
TRAM1L1Q8N609 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TRAM1L1Q8N609 AC083906.6-201ENST00000641366 219 ntBASIC18.67■□□□□ 0.58
TRAM1L1Q8N609 AC068587.9-201ENST00000641814 219 ntBASIC18.67■□□□□ 0.58
TRAM1L1Q8N609 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRAM1L1Q8N609 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRAM1L1Q8N609 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRAM1L1Q8N609 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRAM1L1Q8N609 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRAM1L1Q8N609 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC18.67■□□□□ 0.58
TRAM1L1Q8N609 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRAM1L1Q8N609 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
TRAM1L1Q8N609 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TRAM1L1Q8N609 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRAM1L1Q8N609 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TRAM1L1Q8N609 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TRAM1L1Q8N609 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRAM1L1Q8N609 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRAM1L1Q8N609 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TRAM1L1Q8N609 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRAM1L1Q8N609 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRAM1L1Q8N609 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRAM1L1Q8N609 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRAM1L1Q8N609 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRAM1L1Q8N609 TERF1P1-201ENST00000311003 1181 ntBASIC18.66■□□□□ 0.58
TRAM1L1Q8N609 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRAM1L1Q8N609 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRAM1L1Q8N609 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
TRAM1L1Q8N609 AC005521.1-201ENST00000393351 872 ntBASIC18.66■□□□□ 0.58
TRAM1L1Q8N609 LIN28AP1-201ENST00000429574 405 ntBASIC18.66■□□□□ 0.58
TRAM1L1Q8N609 AC010203.1-204ENST00000548782 407 ntBASIC18.66■□□□□ 0.58
TRAM1L1Q8N609 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC18.66■□□□□ 0.58
TRAM1L1Q8N609 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TRAM1L1Q8N609 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TRAM1L1Q8N609 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TRAM1L1Q8N609 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRAM1L1Q8N609 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
TRAM1L1Q8N609 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TRAM1L1Q8N609 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
TRAM1L1Q8N609 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TRAM1L1Q8N609 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC18.66■□□□□ 0.58
TRAM1L1Q8N609 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRAM1L1Q8N609 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRAM1L1Q8N609 KRT8P45-201ENST00000414328 1447 ntBASIC18.66■□□□□ 0.58
TRAM1L1Q8N609 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC18.66■□□□□ 0.58
TRAM1L1Q8N609 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRAM1L1Q8N609 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.65■□□□□ 0.58
TRAM1L1Q8N609 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRAM1L1Q8N609 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRAM1L1Q8N609 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
TRAM1L1Q8N609 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
TRAM1L1Q8N609 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
TRAM1L1Q8N609 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRAM1L1Q8N609 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRAM1L1Q8N609 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRAM1L1Q8N609 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRAM1L1Q8N609 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRAM1L1Q8N609 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRAM1L1Q8N609 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC18.65■□□□□ 0.58
TRAM1L1Q8N609 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRAM1L1Q8N609 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC18.65■□□□□ 0.58
TRAM1L1Q8N609 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRAM1L1Q8N609 ATP5G1P1-201ENST00000448724 379 ntBASIC18.65■□□□□ 0.58
TRAM1L1Q8N609 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
TRAM1L1Q8N609 WWOX-216ENST00000569818 525 ntBASIC18.65■□□□□ 0.58
TRAM1L1Q8N609 MIR3180-5-201ENST00000583743 153 ntBASIC18.65■□□□□ 0.58
TRAM1L1Q8N609 CR769767.2-201ENST00000622735 460 ntBASIC18.65■□□□□ 0.58
TRAM1L1Q8N609 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
TRAM1L1Q8N609 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TRAM1L1Q8N609 HEIH-201ENST00000623091 1652 ntBASIC18.65■□□□□ 0.58
TRAM1L1Q8N609 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRAM1L1Q8N609 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRAM1L1Q8N609 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC18.65■□□□□ 0.58
TRAM1L1Q8N609 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRAM1L1Q8N609 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
TRAM1L1Q8N609 AC073508.3-201ENST00000619697 1419 ntBASIC18.65■□□□□ 0.58
TRAM1L1Q8N609 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC18.64■□□□□ 0.58
TRAM1L1Q8N609 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
TRAM1L1Q8N609 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC18.64■□□□□ 0.58
TRAM1L1Q8N609 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
TRAM1L1Q8N609 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
TRAM1L1Q8N609 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.64■□□□□ 0.57
TRAM1L1Q8N609 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRAM1L1Q8N609 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC18.64■□□□□ 0.57
TRAM1L1Q8N609 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRAM1L1Q8N609 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms