Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC17.52■□□□□ 0.4
BEST3Q8N1M1 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
BEST3Q8N1M1 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
BEST3Q8N1M1 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
BEST3Q8N1M1 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
BEST3Q8N1M1 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
BEST3Q8N1M1 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC17.52■□□□□ 0.4
BEST3Q8N1M1 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
BEST3Q8N1M1 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC17.52■□□□□ 0.4
BEST3Q8N1M1 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
BEST3Q8N1M1 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
BEST3Q8N1M1 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
BEST3Q8N1M1 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
BEST3Q8N1M1 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC17.52■□□□□ 0.4
BEST3Q8N1M1 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC17.52■□□□□ 0.4
BEST3Q8N1M1 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC17.52■□□□□ 0.4
BEST3Q8N1M1 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
BEST3Q8N1M1 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.4
BEST3Q8N1M1 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
BEST3Q8N1M1 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC17.52■□□□□ 0.4
BEST3Q8N1M1 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
BEST3Q8N1M1 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC17.52■□□□□ 0.4
BEST3Q8N1M1 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
BEST3Q8N1M1 LINC01238-205ENST00000567549 1107 ntBASIC17.52■□□□□ 0.4
BEST3Q8N1M1 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
BEST3Q8N1M1 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC17.52■□□□□ 0.4
BEST3Q8N1M1 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC17.52■□□□□ 0.4
BEST3Q8N1M1 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC17.52■□□□□ 0.4
BEST3Q8N1M1 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
BEST3Q8N1M1 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
BEST3Q8N1M1 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC17.52■□□□□ 0.4
BEST3Q8N1M1 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
BEST3Q8N1M1 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
BEST3Q8N1M1 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
BEST3Q8N1M1 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
BEST3Q8N1M1 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
BEST3Q8N1M1 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
BEST3Q8N1M1 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
BEST3Q8N1M1 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC17.52■□□□□ 0.39
BEST3Q8N1M1 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
BEST3Q8N1M1 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
BEST3Q8N1M1 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC17.51■□□□□ 0.39
BEST3Q8N1M1 BID-204ENST00000399767 2129 ntTSL 2 BASIC17.51■□□□□ 0.39
BEST3Q8N1M1 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
BEST3Q8N1M1 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
BEST3Q8N1M1 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
BEST3Q8N1M1 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
BEST3Q8N1M1 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
BEST3Q8N1M1 ANKRD20A18P-201ENST00000359341 492 ntBASIC17.51■□□□□ 0.39
BEST3Q8N1M1 GUK1-204ENST00000366721 689 ntTSL 3 BASIC17.51■□□□□ 0.39
BEST3Q8N1M1 BUB3-202ENST00000368859 667 ntTSL 3 BASIC17.51■□□□□ 0.39
BEST3Q8N1M1 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC17.51■□□□□ 0.39
BEST3Q8N1M1 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC17.51■□□□□ 0.39
BEST3Q8N1M1 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
BEST3Q8N1M1 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC17.51■□□□□ 0.39
BEST3Q8N1M1 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
BEST3Q8N1M1 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC17.51■□□□□ 0.39
BEST3Q8N1M1 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
BEST3Q8N1M1 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
BEST3Q8N1M1 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
BEST3Q8N1M1 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
BEST3Q8N1M1 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
BEST3Q8N1M1 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
BEST3Q8N1M1 TBC1D3P2-202ENST00000577902 1649 ntBASIC17.5■□□□□ 0.39
BEST3Q8N1M1 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
BEST3Q8N1M1 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.5■□□□□ 0.39
BEST3Q8N1M1 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
BEST3Q8N1M1 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.5■□□□□ 0.39
BEST3Q8N1M1 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC17.5■□□□□ 0.39
BEST3Q8N1M1 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
BEST3Q8N1M1 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
BEST3Q8N1M1 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
BEST3Q8N1M1 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC17.5■□□□□ 0.39
BEST3Q8N1M1 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
BEST3Q8N1M1 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC17.5■□□□□ 0.39
BEST3Q8N1M1 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
BEST3Q8N1M1 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC17.5■□□□□ 0.39
BEST3Q8N1M1 TSPY5P-201ENST00000426936 936 ntBASIC17.5■□□□□ 0.39
BEST3Q8N1M1 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC17.5■□□□□ 0.39
BEST3Q8N1M1 AC092647.4-201ENST00000457211 535 ntBASIC17.5■□□□□ 0.39
BEST3Q8N1M1 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC17.5■□□□□ 0.39
BEST3Q8N1M1 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
BEST3Q8N1M1 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
BEST3Q8N1M1 AC011558.1-201ENST00000623459 338 ntBASIC17.5■□□□□ 0.39
BEST3Q8N1M1 AL023973.1-201ENST00000624619 620 ntBASIC17.5■□□□□ 0.39
BEST3Q8N1M1 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.5■□□□□ 0.39
BEST3Q8N1M1 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
BEST3Q8N1M1 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
BEST3Q8N1M1 TREX1-205ENST00000625293 1783 ntBASIC17.5■□□□□ 0.39
BEST3Q8N1M1 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
BEST3Q8N1M1 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
BEST3Q8N1M1 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
BEST3Q8N1M1 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC17.49■□□□□ 0.39
BEST3Q8N1M1 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
BEST3Q8N1M1 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC17.49■□□□□ 0.39
BEST3Q8N1M1 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC17.49■□□□□ 0.39
BEST3Q8N1M1 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
BEST3Q8N1M1 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
BEST3Q8N1M1 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC17.49■□□□□ 0.39
BEST3Q8N1M1 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms