Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 KRT18P21-201ENST00000515767 1272 ntBASIC17.43■□□□□ 0.38
C9orf40Q8IXQ3 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
C9orf40Q8IXQ3 TK2-213ENST00000563369 882 ntTSL 5 BASIC17.43■□□□□ 0.38
C9orf40Q8IXQ3 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
C9orf40Q8IXQ3 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
C9orf40Q8IXQ3 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
C9orf40Q8IXQ3 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
C9orf40Q8IXQ3 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
C9orf40Q8IXQ3 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
C9orf40Q8IXQ3 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC17.43■□□□□ 0.38
C9orf40Q8IXQ3 RNF165-205ENST00000588679 2904 ntBASIC17.43■□□□□ 0.38
C9orf40Q8IXQ3 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
C9orf40Q8IXQ3 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC17.43■□□□□ 0.38
C9orf40Q8IXQ3 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
C9orf40Q8IXQ3 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.43■□□□□ 0.38
C9orf40Q8IXQ3 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC17.43■□□□□ 0.38
C9orf40Q8IXQ3 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
C9orf40Q8IXQ3 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
C9orf40Q8IXQ3 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
C9orf40Q8IXQ3 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
C9orf40Q8IXQ3 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
C9orf40Q8IXQ3 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC17.42■□□□□ 0.38
C9orf40Q8IXQ3 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC17.42■□□□□ 0.38
C9orf40Q8IXQ3 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
C9orf40Q8IXQ3 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC17.42■□□□□ 0.38
C9orf40Q8IXQ3 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
C9orf40Q8IXQ3 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
C9orf40Q8IXQ3 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
C9orf40Q8IXQ3 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
C9orf40Q8IXQ3 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
C9orf40Q8IXQ3 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
C9orf40Q8IXQ3 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
C9orf40Q8IXQ3 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
C9orf40Q8IXQ3 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
C9orf40Q8IXQ3 LIN28AP1-201ENST00000429574 405 ntBASIC17.42■□□□□ 0.38
C9orf40Q8IXQ3 ATP5G1P1-201ENST00000448724 379 ntBASIC17.42■□□□□ 0.38
C9orf40Q8IXQ3 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC17.42■□□□□ 0.38
C9orf40Q8IXQ3 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC17.42■□□□□ 0.38
C9orf40Q8IXQ3 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC17.42■□□□□ 0.38
C9orf40Q8IXQ3 RN7SL850P-201ENST00000579959 291 ntBASIC17.42■□□□□ 0.38
C9orf40Q8IXQ3 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
C9orf40Q8IXQ3 CR769767.2-201ENST00000622735 460 ntBASIC17.42■□□□□ 0.38
C9orf40Q8IXQ3 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC17.42■□□□□ 0.38
C9orf40Q8IXQ3 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC17.42■□□□□ 0.38
C9orf40Q8IXQ3 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
C9orf40Q8IXQ3 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC17.42■□□□□ 0.38
C9orf40Q8IXQ3 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
C9orf40Q8IXQ3 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
C9orf40Q8IXQ3 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
C9orf40Q8IXQ3 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
C9orf40Q8IXQ3 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
C9orf40Q8IXQ3 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
C9orf40Q8IXQ3 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC17.42■□□□□ 0.38
C9orf40Q8IXQ3 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
C9orf40Q8IXQ3 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC17.42■□□□□ 0.38
C9orf40Q8IXQ3 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
C9orf40Q8IXQ3 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
C9orf40Q8IXQ3 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
C9orf40Q8IXQ3 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
C9orf40Q8IXQ3 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
C9orf40Q8IXQ3 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
C9orf40Q8IXQ3 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
C9orf40Q8IXQ3 AC036111.1-201ENST00000533973 1582 ntBASIC17.41■□□□□ 0.38
C9orf40Q8IXQ3 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
C9orf40Q8IXQ3 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC17.41■□□□□ 0.38
C9orf40Q8IXQ3 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
C9orf40Q8IXQ3 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
C9orf40Q8IXQ3 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
C9orf40Q8IXQ3 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
C9orf40Q8IXQ3 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
C9orf40Q8IXQ3 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
C9orf40Q8IXQ3 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC17.41■□□□□ 0.38
C9orf40Q8IXQ3 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
C9orf40Q8IXQ3 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC17.41■□□□□ 0.38
C9orf40Q8IXQ3 AL138966.2-201ENST00000621997 464 ntBASIC17.41■□□□□ 0.38
C9orf40Q8IXQ3 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC17.41■□□□□ 0.38
C9orf40Q8IXQ3 AC068587.9-201ENST00000641814 219 ntBASIC17.41■□□□□ 0.38
C9orf40Q8IXQ3 AC092865.7-201ENST00000641832 219 ntBASIC17.41■□□□□ 0.38
C9orf40Q8IXQ3 AC008556.1-201ENST00000610908 2040 ntBASIC17.41■□□□□ 0.38
C9orf40Q8IXQ3 LGALS8-AS1-201ENST00000487567 1457 ntBASIC17.41■□□□□ 0.38
C9orf40Q8IXQ3 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC17.41■□□□□ 0.38
C9orf40Q8IXQ3 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC17.41■□□□□ 0.38
C9orf40Q8IXQ3 AL109659.2-201ENST00000606809 1674 ntBASIC17.41■□□□□ 0.38
C9orf40Q8IXQ3 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
C9orf40Q8IXQ3 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
C9orf40Q8IXQ3 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
C9orf40Q8IXQ3 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
C9orf40Q8IXQ3 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
C9orf40Q8IXQ3 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
C9orf40Q8IXQ3 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
C9orf40Q8IXQ3 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
C9orf40Q8IXQ3 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC17.4■□□□□ 0.38
C9orf40Q8IXQ3 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
C9orf40Q8IXQ3 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
C9orf40Q8IXQ3 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
C9orf40Q8IXQ3 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC17.4■□□□□ 0.38
C9orf40Q8IXQ3 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
C9orf40Q8IXQ3 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC17.4■□□□□ 0.38
C9orf40Q8IXQ3 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
C9orf40Q8IXQ3 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms