Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 AL355802.2-201ENST00000402069 882 ntBASIC12.17□□□□□ -0.46
MRPL55Q7Z7F7 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC12.17□□□□□ -0.46
MRPL55Q7Z7F7 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC12.17□□□□□ -0.46
MRPL55Q7Z7F7 RHOD-202ENST00000532559 538 ntTSL 3 BASIC12.17□□□□□ -0.46
MRPL55Q7Z7F7 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
MRPL55Q7Z7F7 AC004264.1-201ENST00000608354 794 ntBASIC12.17□□□□□ -0.46
MRPL55Q7Z7F7 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC12.17□□□□□ -0.46
MRPL55Q7Z7F7 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
MRPL55Q7Z7F7 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC12.17□□□□□ -0.46
MRPL55Q7Z7F7 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
MRPL55Q7Z7F7 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
MRPL55Q7Z7F7 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
MRPL55Q7Z7F7 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
MRPL55Q7Z7F7 FP475955.4-201ENST00000623131 1990 ntBASIC12.17□□□□□ -0.46
MRPL55Q7Z7F7 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
MRPL55Q7Z7F7 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC12.17□□□□□ -0.46
MRPL55Q7Z7F7 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC12.17□□□□□ -0.46
MRPL55Q7Z7F7 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
MRPL55Q7Z7F7 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
MRPL55Q7Z7F7 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
MRPL55Q7Z7F7 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
MRPL55Q7Z7F7 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
MRPL55Q7Z7F7 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
MRPL55Q7Z7F7 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
MRPL55Q7Z7F7 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
MRPL55Q7Z7F7 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
MRPL55Q7Z7F7 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
MRPL55Q7Z7F7 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
MRPL55Q7Z7F7 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
MRPL55Q7Z7F7 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
MRPL55Q7Z7F7 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC12.16□□□□□ -0.46
MRPL55Q7Z7F7 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
MRPL55Q7Z7F7 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
MRPL55Q7Z7F7 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC12.16□□□□□ -0.46
MRPL55Q7Z7F7 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC12.16□□□□□ -0.46
MRPL55Q7Z7F7 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
MRPL55Q7Z7F7 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
MRPL55Q7Z7F7 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
MRPL55Q7Z7F7 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC12.16□□□□□ -0.46
MRPL55Q7Z7F7 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC12.16□□□□□ -0.46
MRPL55Q7Z7F7 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
MRPL55Q7Z7F7 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
MRPL55Q7Z7F7 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
MRPL55Q7Z7F7 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
MRPL55Q7Z7F7 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
MRPL55Q7Z7F7 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
MRPL55Q7Z7F7 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
MRPL55Q7Z7F7 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
MRPL55Q7Z7F7 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
MRPL55Q7Z7F7 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC12.16□□□□□ -0.46
MRPL55Q7Z7F7 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
MRPL55Q7Z7F7 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC12.16□□□□□ -0.46
MRPL55Q7Z7F7 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
MRPL55Q7Z7F7 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
MRPL55Q7Z7F7 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
MRPL55Q7Z7F7 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC12.16□□□□□ -0.46
MRPL55Q7Z7F7 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
MRPL55Q7Z7F7 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC12.16□□□□□ -0.46
MRPL55Q7Z7F7 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC12.16□□□□□ -0.46
MRPL55Q7Z7F7 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
MRPL55Q7Z7F7 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
MRPL55Q7Z7F7 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC12.16□□□□□ -0.46
MRPL55Q7Z7F7 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
MRPL55Q7Z7F7 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC12.16□□□□□ -0.46
MRPL55Q7Z7F7 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
MRPL55Q7Z7F7 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
MRPL55Q7Z7F7 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC12.16□□□□□ -0.46
MRPL55Q7Z7F7 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
MRPL55Q7Z7F7 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
MRPL55Q7Z7F7 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC12.16□□□□□ -0.46
MRPL55Q7Z7F7 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
MRPL55Q7Z7F7 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC12.16□□□□□ -0.46
MRPL55Q7Z7F7 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
MRPL55Q7Z7F7 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
MRPL55Q7Z7F7 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
MRPL55Q7Z7F7 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
MRPL55Q7Z7F7 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC12.16□□□□□ -0.46
MRPL55Q7Z7F7 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
MRPL55Q7Z7F7 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
MRPL55Q7Z7F7 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
MRPL55Q7Z7F7 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
MRPL55Q7Z7F7 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
MRPL55Q7Z7F7 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC12.15□□□□□ -0.46
MRPL55Q7Z7F7 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC12.15□□□□□ -0.46
MRPL55Q7Z7F7 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
MRPL55Q7Z7F7 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC12.15□□□□□ -0.46
MRPL55Q7Z7F7 AC006333.2-201ENST00000607957 2099 ntBASIC12.15□□□□□ -0.46
MRPL55Q7Z7F7 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC12.15□□□□□ -0.46
MRPL55Q7Z7F7 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
MRPL55Q7Z7F7 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
MRPL55Q7Z7F7 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
MRPL55Q7Z7F7 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
MRPL55Q7Z7F7 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC12.15□□□□□ -0.46
MRPL55Q7Z7F7 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
MRPL55Q7Z7F7 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
MRPL55Q7Z7F7 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
MRPL55Q7Z7F7 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
MRPL55Q7Z7F7 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
MRPL55Q7Z7F7 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
MRPL55Q7Z7F7 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC12.15□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms