Protein–RNA interactions for Protein: Q7Z5J4

RAI1, Retinoic acid-induced protein 1, humanhuman

Predicted RBP Predictions only

Length 1,906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1Q7Z5J4 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC16.11■□□□□ 0.17
RAI1Q7Z5J4 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC16.11■□□□□ 0.17
RAI1Q7Z5J4 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC16.11■□□□□ 0.17
RAI1Q7Z5J4 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAI1Q7Z5J4 KRT8P10-201ENST00000450021 1447 ntBASIC16.11■□□□□ 0.17
RAI1Q7Z5J4 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAI1Q7Z5J4 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAI1Q7Z5J4 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAI1Q7Z5J4 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAI1Q7Z5J4 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAI1Q7Z5J4 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RAI1Q7Z5J4 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAI1Q7Z5J4 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAI1Q7Z5J4 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC16.11■□□□□ 0.17
RAI1Q7Z5J4 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RAI1Q7Z5J4 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAI1Q7Z5J4 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC16.11■□□□□ 0.17
RAI1Q7Z5J4 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC16.11■□□□□ 0.17
RAI1Q7Z5J4 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC16.11■□□□□ 0.17
RAI1Q7Z5J4 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC16.11■□□□□ 0.17
RAI1Q7Z5J4 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC16.11■□□□□ 0.17
RAI1Q7Z5J4 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAI1Q7Z5J4 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAI1Q7Z5J4 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAI1Q7Z5J4 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAI1Q7Z5J4 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RAI1Q7Z5J4 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
RAI1Q7Z5J4 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
RAI1Q7Z5J4 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC16.11■□□□□ 0.17
RAI1Q7Z5J4 AC007952.6-201ENST00000573168 2673 ntBASIC16.11■□□□□ 0.17
RAI1Q7Z5J4 AC003957.1-201ENST00000625108 2673 ntBASIC16.11■□□□□ 0.17
RAI1Q7Z5J4 AC116562.4-201ENST00000641316 2276 ntBASIC16.11■□□□□ 0.17
RAI1Q7Z5J4 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAI1Q7Z5J4 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC16.11■□□□□ 0.17
RAI1Q7Z5J4 SDHAP1-207ENST00000440850 2000 ntBASIC16.11■□□□□ 0.17
RAI1Q7Z5J4 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC16.11■□□□□ 0.17
RAI1Q7Z5J4 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC16.11■□□□□ 0.17
RAI1Q7Z5J4 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC16.1■□□□□ 0.17
RAI1Q7Z5J4 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
RAI1Q7Z5J4 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RAI1Q7Z5J4 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
RAI1Q7Z5J4 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
RAI1Q7Z5J4 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC16.1■□□□□ 0.17
RAI1Q7Z5J4 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RAI1Q7Z5J4 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RAI1Q7Z5J4 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RAI1Q7Z5J4 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
RAI1Q7Z5J4 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
RAI1Q7Z5J4 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC16.1■□□□□ 0.17
RAI1Q7Z5J4 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RAI1Q7Z5J4 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RAI1Q7Z5J4 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
RAI1Q7Z5J4 MIR3180-5-201ENST00000583743 153 ntBASIC16.1■□□□□ 0.17
RAI1Q7Z5J4 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RAI1Q7Z5J4 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RAI1Q7Z5J4 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RAI1Q7Z5J4 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
RAI1Q7Z5J4 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RAI1Q7Z5J4 TEX21P-204ENST00000641479 1693 ntBASIC16.1■□□□□ 0.17
RAI1Q7Z5J4 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC16.1■□□□□ 0.17
RAI1Q7Z5J4 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RAI1Q7Z5J4 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RAI1Q7Z5J4 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
RAI1Q7Z5J4 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RAI1Q7Z5J4 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RAI1Q7Z5J4 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RAI1Q7Z5J4 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RAI1Q7Z5J4 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
RAI1Q7Z5J4 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
RAI1Q7Z5J4 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RAI1Q7Z5J4 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC16.09■□□□□ 0.17
RAI1Q7Z5J4 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC16.09■□□□□ 0.17
RAI1Q7Z5J4 AC111152.3-201ENST00000569699 673 ntBASIC16.09■□□□□ 0.17
RAI1Q7Z5J4 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
RAI1Q7Z5J4 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC16.09■□□□□ 0.17
RAI1Q7Z5J4 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
RAI1Q7Z5J4 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC16.09■□□□□ 0.17
RAI1Q7Z5J4 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
RAI1Q7Z5J4 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
RAI1Q7Z5J4 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RAI1Q7Z5J4 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC16.09■□□□□ 0.17
RAI1Q7Z5J4 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC16.09■□□□□ 0.17
RAI1Q7Z5J4 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC16.09■□□□□ 0.17
RAI1Q7Z5J4 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RAI1Q7Z5J4 AC093484.2-201ENST00000580996 2166 ntBASIC16.09■□□□□ 0.17
RAI1Q7Z5J4 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RAI1Q7Z5J4 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
RAI1Q7Z5J4 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RAI1Q7Z5J4 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
RAI1Q7Z5J4 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
RAI1Q7Z5J4 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC16.09■□□□□ 0.17
RAI1Q7Z5J4 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
RAI1Q7Z5J4 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC16.09■□□□□ 0.17
RAI1Q7Z5J4 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RAI1Q7Z5J4 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC16.09■□□□□ 0.17
RAI1Q7Z5J4 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC16.09■□□□□ 0.17
RAI1Q7Z5J4 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC16.09■□□□□ 0.17
RAI1Q7Z5J4 TEN1-204ENST00000588202 862 ntTSL 3 BASIC16.09■□□□□ 0.17
RAI1Q7Z5J4 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC16.09■□□□□ 0.17
RAI1Q7Z5J4 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms