Protein–RNA interactions for Protein: Q6ZTQ4

CDHR3, Cadherin-related family member 3, humanhuman

Predictions only

Length 885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3Q6ZTQ4 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CDHR3Q6ZTQ4 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC18.98■□□□□ 0.63
CDHR3Q6ZTQ4 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CDHR3Q6ZTQ4 F2R-202ENST00000505600 442 ntTSL 2 BASIC18.98■□□□□ 0.63
CDHR3Q6ZTQ4 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC18.98■□□□□ 0.63
CDHR3Q6ZTQ4 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC18.98■□□□□ 0.63
CDHR3Q6ZTQ4 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC18.98■□□□□ 0.63
CDHR3Q6ZTQ4 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDHR3Q6ZTQ4 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC18.98■□□□□ 0.63
CDHR3Q6ZTQ4 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
CDHR3Q6ZTQ4 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDHR3Q6ZTQ4 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDHR3Q6ZTQ4 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDHR3Q6ZTQ4 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CDHR3Q6ZTQ4 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
CDHR3Q6ZTQ4 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDHR3Q6ZTQ4 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDHR3Q6ZTQ4 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CDHR3Q6ZTQ4 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDHR3Q6ZTQ4 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDHR3Q6ZTQ4 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.97■□□□□ 0.63
CDHR3Q6ZTQ4 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CDHR3Q6ZTQ4 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDHR3Q6ZTQ4 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.97■□□□□ 0.63
CDHR3Q6ZTQ4 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
CDHR3Q6ZTQ4 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDHR3Q6ZTQ4 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC18.97■□□□□ 0.63
CDHR3Q6ZTQ4 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDHR3Q6ZTQ4 AC068880.1-201ENST00000507289 2297 ntBASIC18.97■□□□□ 0.63
CDHR3Q6ZTQ4 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CDHR3Q6ZTQ4 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC18.97■□□□□ 0.63
CDHR3Q6ZTQ4 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.97■□□□□ 0.63
CDHR3Q6ZTQ4 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
CDHR3Q6ZTQ4 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.97■□□□□ 0.63
CDHR3Q6ZTQ4 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC18.97■□□□□ 0.63
CDHR3Q6ZTQ4 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC18.97■□□□□ 0.63
CDHR3Q6ZTQ4 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
CDHR3Q6ZTQ4 KRT18P16-201ENST00000510337 1294 ntBASIC18.97■□□□□ 0.63
CDHR3Q6ZTQ4 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC18.97■□□□□ 0.63
CDHR3Q6ZTQ4 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC18.97■□□□□ 0.63
CDHR3Q6ZTQ4 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC18.97■□□□□ 0.63
CDHR3Q6ZTQ4 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC18.97■□□□□ 0.63
CDHR3Q6ZTQ4 CABP2-204ENST00000636477 941 ntTSL 5 BASIC18.97■□□□□ 0.63
CDHR3Q6ZTQ4 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.97■□□□□ 0.63
CDHR3Q6ZTQ4 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC18.97■□□□□ 0.63
CDHR3Q6ZTQ4 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDHR3Q6ZTQ4 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDHR3Q6ZTQ4 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.97■□□□□ 0.63
CDHR3Q6ZTQ4 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
CDHR3Q6ZTQ4 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC18.97■□□□□ 0.63
CDHR3Q6ZTQ4 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC18.97■□□□□ 0.63
CDHR3Q6ZTQ4 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDHR3Q6ZTQ4 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
CDHR3Q6ZTQ4 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDHR3Q6ZTQ4 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDHR3Q6ZTQ4 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.97■□□□□ 0.63
CDHR3Q6ZTQ4 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CDHR3Q6ZTQ4 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDHR3Q6ZTQ4 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDHR3Q6ZTQ4 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDHR3Q6ZTQ4 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDHR3Q6ZTQ4 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDHR3Q6ZTQ4 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.96■□□□□ 0.63
CDHR3Q6ZTQ4 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.96■□□□□ 0.63
CDHR3Q6ZTQ4 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDHR3Q6ZTQ4 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CDHR3Q6ZTQ4 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CDHR3Q6ZTQ4 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDHR3Q6ZTQ4 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDHR3Q6ZTQ4 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
CDHR3Q6ZTQ4 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
CDHR3Q6ZTQ4 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
CDHR3Q6ZTQ4 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC18.96■□□□□ 0.63
CDHR3Q6ZTQ4 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC18.96■□□□□ 0.63
CDHR3Q6ZTQ4 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CDHR3Q6ZTQ4 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC18.96■□□□□ 0.63
CDHR3Q6ZTQ4 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CDHR3Q6ZTQ4 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CDHR3Q6ZTQ4 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC18.96■□□□□ 0.63
CDHR3Q6ZTQ4 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDHR3Q6ZTQ4 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC18.96■□□□□ 0.63
CDHR3Q6ZTQ4 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
CDHR3Q6ZTQ4 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC18.96■□□□□ 0.63
CDHR3Q6ZTQ4 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDHR3Q6ZTQ4 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDHR3Q6ZTQ4 NOC2LP2-201ENST00000407594 1944 ntBASIC18.96■□□□□ 0.63
CDHR3Q6ZTQ4 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDHR3Q6ZTQ4 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CDHR3Q6ZTQ4 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDHR3Q6ZTQ4 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDHR3Q6ZTQ4 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDHR3Q6ZTQ4 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.95■□□□□ 0.62
CDHR3Q6ZTQ4 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CDHR3Q6ZTQ4 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDHR3Q6ZTQ4 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CDHR3Q6ZTQ4 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDHR3Q6ZTQ4 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC18.95■□□□□ 0.62
CDHR3Q6ZTQ4 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDHR3Q6ZTQ4 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC18.95■□□□□ 0.62
CDHR3Q6ZTQ4 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms