Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
TTC39BQ5VTQ0 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
TTC39BQ5VTQ0 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TTC39BQ5VTQ0 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TTC39BQ5VTQ0 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TTC39BQ5VTQ0 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
TTC39BQ5VTQ0 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TTC39BQ5VTQ0 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TTC39BQ5VTQ0 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
TTC39BQ5VTQ0 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC19.67■□□□□ 0.74
TTC39BQ5VTQ0 AIRN-201ENST00000601203 4374 ntBASIC19.67■□□□□ 0.74
TTC39BQ5VTQ0 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC19.67■□□□□ 0.74
TTC39BQ5VTQ0 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC19.67■□□□□ 0.74
TTC39BQ5VTQ0 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
TTC39BQ5VTQ0 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC19.67■□□□□ 0.74
TTC39BQ5VTQ0 CRAT-202ENST00000393384 973 ntTSL 2 BASIC19.67■□□□□ 0.74
TTC39BQ5VTQ0 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC19.67■□□□□ 0.74
TTC39BQ5VTQ0 TSPY23P-201ENST00000440136 739 ntBASIC19.67■□□□□ 0.74
TTC39BQ5VTQ0 CCR12P-201ENST00000446203 998 ntBASIC19.67■□□□□ 0.74
TTC39BQ5VTQ0 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC19.67■□□□□ 0.74
TTC39BQ5VTQ0 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
TTC39BQ5VTQ0 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC19.67■□□□□ 0.74
TTC39BQ5VTQ0 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19.67■□□□□ 0.74
TTC39BQ5VTQ0 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TTC39BQ5VTQ0 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.67■□□□□ 0.74
TTC39BQ5VTQ0 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
TTC39BQ5VTQ0 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TTC39BQ5VTQ0 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TTC39BQ5VTQ0 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.67■□□□□ 0.74
TTC39BQ5VTQ0 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TTC39BQ5VTQ0 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC19.67■□□□□ 0.74
TTC39BQ5VTQ0 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC19.67■□□□□ 0.74
TTC39BQ5VTQ0 CYP2D8P-201ENST00000433633 1490 ntBASIC19.67■□□□□ 0.74
TTC39BQ5VTQ0 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC19.67■□□□□ 0.74
TTC39BQ5VTQ0 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TTC39BQ5VTQ0 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TTC39BQ5VTQ0 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TTC39BQ5VTQ0 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC19.66■□□□□ 0.74
TTC39BQ5VTQ0 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TTC39BQ5VTQ0 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
TTC39BQ5VTQ0 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TTC39BQ5VTQ0 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC19.66■□□□□ 0.74
TTC39BQ5VTQ0 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC19.66■□□□□ 0.74
TTC39BQ5VTQ0 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TTC39BQ5VTQ0 PRR31-201ENST00000371629 978 ntTSL 2 BASIC19.66■□□□□ 0.74
TTC39BQ5VTQ0 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
TTC39BQ5VTQ0 AC128688.1-201ENST00000487626 519 ntBASIC19.66■□□□□ 0.74
TTC39BQ5VTQ0 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
TTC39BQ5VTQ0 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC19.66■□□□□ 0.74
TTC39BQ5VTQ0 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC19.66■□□□□ 0.74
TTC39BQ5VTQ0 KRT18P22-201ENST00000402024 1347 ntBASIC19.66■□□□□ 0.74
TTC39BQ5VTQ0 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TTC39BQ5VTQ0 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TTC39BQ5VTQ0 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC19.66■□□□□ 0.74
TTC39BQ5VTQ0 LINC01568-207ENST00000641790 1380 ntBASIC19.66■□□□□ 0.74
TTC39BQ5VTQ0 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
TTC39BQ5VTQ0 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
TTC39BQ5VTQ0 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
TTC39BQ5VTQ0 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TTC39BQ5VTQ0 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TTC39BQ5VTQ0 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC19.66■□□□□ 0.74
TTC39BQ5VTQ0 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TTC39BQ5VTQ0 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TTC39BQ5VTQ0 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
TTC39BQ5VTQ0 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC19.65■□□□□ 0.74
TTC39BQ5VTQ0 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TTC39BQ5VTQ0 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TTC39BQ5VTQ0 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
TTC39BQ5VTQ0 ECEL1P3-201ENST00000427961 737 ntBASIC19.65■□□□□ 0.74
TTC39BQ5VTQ0 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TTC39BQ5VTQ0 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC19.65■□□□□ 0.74
TTC39BQ5VTQ0 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC19.65■□□□□ 0.74
TTC39BQ5VTQ0 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC19.65■□□□□ 0.74
TTC39BQ5VTQ0 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TTC39BQ5VTQ0 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
TTC39BQ5VTQ0 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC19.65■□□□□ 0.74
TTC39BQ5VTQ0 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.65■□□□□ 0.74
TTC39BQ5VTQ0 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TTC39BQ5VTQ0 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
TTC39BQ5VTQ0 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC19.65■□□□□ 0.74
TTC39BQ5VTQ0 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC19.65■□□□□ 0.74
TTC39BQ5VTQ0 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
TTC39BQ5VTQ0 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
TTC39BQ5VTQ0 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
TTC39BQ5VTQ0 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
TTC39BQ5VTQ0 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.64■□□□□ 0.74
TTC39BQ5VTQ0 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.64■□□□□ 0.74
TTC39BQ5VTQ0 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TTC39BQ5VTQ0 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TTC39BQ5VTQ0 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC19.64■□□□□ 0.73
TTC39BQ5VTQ0 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC19.64■□□□□ 0.73
TTC39BQ5VTQ0 AC116562.4-202ENST00000641738 218 ntBASIC19.64■□□□□ 0.73
TTC39BQ5VTQ0 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC19.64■□□□□ 0.73
TTC39BQ5VTQ0 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC19.64■□□□□ 0.73
TTC39BQ5VTQ0 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
TTC39BQ5VTQ0 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
TTC39BQ5VTQ0 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
TTC39BQ5VTQ0 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
TTC39BQ5VTQ0 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TTC39BQ5VTQ0 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms