Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.22
ATPAF1Q5TC12 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ATPAF1Q5TC12 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ATPAF1Q5TC12 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
ATPAF1Q5TC12 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
ATPAF1Q5TC12 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ATPAF1Q5TC12 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ATPAF1Q5TC12 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC16.39■□□□□ 0.21
ATPAF1Q5TC12 AL031598.1-201ENST00000561511 1773 ntBASIC16.39■□□□□ 0.21
ATPAF1Q5TC12 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ATPAF1Q5TC12 BICD1-207ENST00000551848 1962 ntBASIC16.39■□□□□ 0.21
ATPAF1Q5TC12 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
ATPAF1Q5TC12 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ATPAF1Q5TC12 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
ATPAF1Q5TC12 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
ATPAF1Q5TC12 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
ATPAF1Q5TC12 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ATPAF1Q5TC12 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ATPAF1Q5TC12 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
ATPAF1Q5TC12 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ATPAF1Q5TC12 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
ATPAF1Q5TC12 ISG20-202ENST00000379224 540 ntTSL 3 BASIC16.39■□□□□ 0.21
ATPAF1Q5TC12 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
ATPAF1Q5TC12 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
ATPAF1Q5TC12 LY6E-205ENST00000519611 635 ntTSL 3 BASIC16.39■□□□□ 0.21
ATPAF1Q5TC12 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
ATPAF1Q5TC12 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC16.39■□□□□ 0.21
ATPAF1Q5TC12 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC16.39■□□□□ 0.21
ATPAF1Q5TC12 Six3os1_6.1-201ENST00000620790 196 ntBASIC16.39■□□□□ 0.21
ATPAF1Q5TC12 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC16.39■□□□□ 0.21
ATPAF1Q5TC12 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC16.39■□□□□ 0.21
ATPAF1Q5TC12 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC16.39■□□□□ 0.21
ATPAF1Q5TC12 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ATPAF1Q5TC12 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ATPAF1Q5TC12 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
ATPAF1Q5TC12 NBPF21P-201ENST00000425093 1451 ntBASIC16.39■□□□□ 0.21
ATPAF1Q5TC12 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ATPAF1Q5TC12 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
ATPAF1Q5TC12 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
ATPAF1Q5TC12 AP000997.3-201ENST00000623333 2250 ntBASIC16.39■□□□□ 0.21
ATPAF1Q5TC12 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC16.39■□□□□ 0.21
ATPAF1Q5TC12 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
ATPAF1Q5TC12 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
ATPAF1Q5TC12 NOC2LP2-201ENST00000407594 1944 ntBASIC16.39■□□□□ 0.21
ATPAF1Q5TC12 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC16.39■□□□□ 0.21
ATPAF1Q5TC12 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC16.39■□□□□ 0.21
ATPAF1Q5TC12 AC020916.1-201ENST00000587762 1774 ntBASIC16.38■□□□□ 0.21
ATPAF1Q5TC12 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC16.38■□□□□ 0.21
ATPAF1Q5TC12 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC16.38■□□□□ 0.21
ATPAF1Q5TC12 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ATPAF1Q5TC12 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ATPAF1Q5TC12 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ATPAF1Q5TC12 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
ATPAF1Q5TC12 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ATPAF1Q5TC12 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ATPAF1Q5TC12 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ATPAF1Q5TC12 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
ATPAF1Q5TC12 AL354751.1-201ENST00000412768 1863 ntBASIC16.38■□□□□ 0.21
ATPAF1Q5TC12 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC16.38■□□□□ 0.21
ATPAF1Q5TC12 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC16.38■□□□□ 0.21
ATPAF1Q5TC12 GOLGA6L3-201ENST00000507199 1679 ntBASIC16.38■□□□□ 0.21
ATPAF1Q5TC12 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ATPAF1Q5TC12 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
ATPAF1Q5TC12 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ATPAF1Q5TC12 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC16.38■□□□□ 0.21
ATPAF1Q5TC12 SERF2-207ENST00000409614 582 ntTSL 2 BASIC16.38■□□□□ 0.21
ATPAF1Q5TC12 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC16.38■□□□□ 0.21
ATPAF1Q5TC12 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC16.38■□□□□ 0.21
ATPAF1Q5TC12 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC16.38■□□□□ 0.21
ATPAF1Q5TC12 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
ATPAF1Q5TC12 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
ATPAF1Q5TC12 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC16.38■□□□□ 0.21
ATPAF1Q5TC12 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
ATPAF1Q5TC12 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
ATPAF1Q5TC12 AL023875.1-201ENST00000640777 796 ntBASIC16.38■□□□□ 0.21
ATPAF1Q5TC12 BCL2-203ENST00000589955 5011 ntBASIC16.38■□□□□ 0.21
ATPAF1Q5TC12 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
ATPAF1Q5TC12 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
ATPAF1Q5TC12 NOC2LP1-202ENST00000452600 2235 ntBASIC16.38■□□□□ 0.21
ATPAF1Q5TC12 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ATPAF1Q5TC12 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
ATPAF1Q5TC12 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC16.38■□□□□ 0.21
ATPAF1Q5TC12 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ATPAF1Q5TC12 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
ATPAF1Q5TC12 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ATPAF1Q5TC12 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ATPAF1Q5TC12 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
ATPAF1Q5TC12 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
ATPAF1Q5TC12 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
ATPAF1Q5TC12 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ATPAF1Q5TC12 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
ATPAF1Q5TC12 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
ATPAF1Q5TC12 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC16.37■□□□□ 0.21
ATPAF1Q5TC12 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
ATPAF1Q5TC12 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
ATPAF1Q5TC12 PRORSD1P-201ENST00000295112 541 ntBASIC16.37■□□□□ 0.21
ATPAF1Q5TC12 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
ATPAF1Q5TC12 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC16.37■□□□□ 0.21
ATPAF1Q5TC12 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
ATPAF1Q5TC12 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms