Protein–RNA interactions for Protein: Q5SW96

LDLRAP1, Low density lipoprotein receptor adapter protein 1, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1Q5SW96 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
LDLRAP1Q5SW96 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LDLRAP1Q5SW96 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC18.8■□□□□ 0.6
LDLRAP1Q5SW96 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
LDLRAP1Q5SW96 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
LDLRAP1Q5SW96 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
LDLRAP1Q5SW96 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LDLRAP1Q5SW96 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC18.79■□□□□ 0.6
LDLRAP1Q5SW96 LETM1P2-201ENST00000597330 2178 ntBASIC18.79■□□□□ 0.6
LDLRAP1Q5SW96 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
LDLRAP1Q5SW96 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC18.79■□□□□ 0.6
LDLRAP1Q5SW96 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LDLRAP1Q5SW96 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
LDLRAP1Q5SW96 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LDLRAP1Q5SW96 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC18.79■□□□□ 0.6
LDLRAP1Q5SW96 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
LDLRAP1Q5SW96 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LDLRAP1Q5SW96 PRR31-201ENST00000371629 978 ntTSL 2 BASIC18.79■□□□□ 0.6
LDLRAP1Q5SW96 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC18.79■□□□□ 0.6
LDLRAP1Q5SW96 AC087499.1-201ENST00000418141 1075 ntBASIC18.79■□□□□ 0.6
LDLRAP1Q5SW96 SLC25A1P2-201ENST00000430693 912 ntBASIC18.79■□□□□ 0.6
LDLRAP1Q5SW96 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LDLRAP1Q5SW96 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC18.79■□□□□ 0.6
LDLRAP1Q5SW96 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC18.79■□□□□ 0.6
LDLRAP1Q5SW96 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
LDLRAP1Q5SW96 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LDLRAP1Q5SW96 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
LDLRAP1Q5SW96 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LDLRAP1Q5SW96 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LDLRAP1Q5SW96 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LDLRAP1Q5SW96 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
LDLRAP1Q5SW96 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LDLRAP1Q5SW96 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
LDLRAP1Q5SW96 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LDLRAP1Q5SW96 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
LDLRAP1Q5SW96 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC18.79■□□□□ 0.6
LDLRAP1Q5SW96 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
LDLRAP1Q5SW96 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
LDLRAP1Q5SW96 AP000974.1-201ENST00000623909 2387 ntBASIC18.78■□□□□ 0.6
LDLRAP1Q5SW96 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC18.78■□□□□ 0.6
LDLRAP1Q5SW96 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LDLRAP1Q5SW96 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC18.78■□□□□ 0.6
LDLRAP1Q5SW96 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LDLRAP1Q5SW96 KRT8P9-201ENST00000558927 1449 ntBASIC18.78■□□□□ 0.6
LDLRAP1Q5SW96 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC18.78■□□□□ 0.6
LDLRAP1Q5SW96 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LDLRAP1Q5SW96 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
LDLRAP1Q5SW96 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LDLRAP1Q5SW96 CCR12P-201ENST00000446203 998 ntBASIC18.78■□□□□ 0.6
LDLRAP1Q5SW96 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
LDLRAP1Q5SW96 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC18.78■□□□□ 0.6
LDLRAP1Q5SW96 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC18.78■□□□□ 0.6
LDLRAP1Q5SW96 RPS20-210ENST00000523936 899 ntTSL 2 BASIC18.78■□□□□ 0.6
LDLRAP1Q5SW96 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC18.78■□□□□ 0.6
LDLRAP1Q5SW96 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
LDLRAP1Q5SW96 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC18.78■□□□□ 0.6
LDLRAP1Q5SW96 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC18.78■□□□□ 0.6
LDLRAP1Q5SW96 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LDLRAP1Q5SW96 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LDLRAP1Q5SW96 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC18.78■□□□□ 0.6
LDLRAP1Q5SW96 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LDLRAP1Q5SW96 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
LDLRAP1Q5SW96 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
LDLRAP1Q5SW96 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
LDLRAP1Q5SW96 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
LDLRAP1Q5SW96 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
LDLRAP1Q5SW96 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LDLRAP1Q5SW96 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
LDLRAP1Q5SW96 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LDLRAP1Q5SW96 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
LDLRAP1Q5SW96 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC18.77■□□□□ 0.6
LDLRAP1Q5SW96 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LDLRAP1Q5SW96 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
LDLRAP1Q5SW96 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18.77■□□□□ 0.6
LDLRAP1Q5SW96 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC18.77■□□□□ 0.6
LDLRAP1Q5SW96 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
LDLRAP1Q5SW96 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
LDLRAP1Q5SW96 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LDLRAP1Q5SW96 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
LDLRAP1Q5SW96 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC18.77■□□□□ 0.6
LDLRAP1Q5SW96 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LDLRAP1Q5SW96 TSPY14P-201ENST00000303979 915 ntBASIC18.77■□□□□ 0.6
LDLRAP1Q5SW96 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC18.77■□□□□ 0.6
LDLRAP1Q5SW96 HIST1H2APS4-201ENST00000362070 348 ntBASIC18.77■□□□□ 0.6
LDLRAP1Q5SW96 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC18.77■□□□□ 0.6
LDLRAP1Q5SW96 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC18.77■□□□□ 0.6
LDLRAP1Q5SW96 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC18.77■□□□□ 0.6
LDLRAP1Q5SW96 EGLN1P1-201ENST00000531623 762 ntBASIC18.77■□□□□ 0.6
LDLRAP1Q5SW96 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
LDLRAP1Q5SW96 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC18.77■□□□□ 0.6
LDLRAP1Q5SW96 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC18.77■□□□□ 0.6
LDLRAP1Q5SW96 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
LDLRAP1Q5SW96 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC18.77■□□□□ 0.6
LDLRAP1Q5SW96 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC18.77■□□□□ 0.6
LDLRAP1Q5SW96 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
LDLRAP1Q5SW96 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
LDLRAP1Q5SW96 CYP2D8P-201ENST00000433633 1490 ntBASIC18.77■□□□□ 0.59
LDLRAP1Q5SW96 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
LDLRAP1Q5SW96 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
LDLRAP1Q5SW96 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms