Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.01■□□□□ 0.79
VARS2Q5ST30 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
VARS2Q5ST30 AL512353.2-201ENST00000448759 1962 ntBASIC20.01■□□□□ 0.79
VARS2Q5ST30 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
VARS2Q5ST30 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
VARS2Q5ST30 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
VARS2Q5ST30 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.01■□□□□ 0.79
VARS2Q5ST30 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
VARS2Q5ST30 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
VARS2Q5ST30 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.01■□□□□ 0.79
VARS2Q5ST30 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
VARS2Q5ST30 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
VARS2Q5ST30 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
VARS2Q5ST30 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
VARS2Q5ST30 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
VARS2Q5ST30 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
VARS2Q5ST30 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
VARS2Q5ST30 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
VARS2Q5ST30 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
VARS2Q5ST30 RASA4DP-201ENST00000460726 1199 ntBASIC20.01■□□□□ 0.79
VARS2Q5ST30 PTK2-216ENST00000519881 863 ntTSL 3 BASIC20.01■□□□□ 0.79
VARS2Q5ST30 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC20.01■□□□□ 0.79
VARS2Q5ST30 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC20.01■□□□□ 0.79
VARS2Q5ST30 FGF14-AS2-201ENST00000606448 1074 ntBASIC20.01■□□□□ 0.79
VARS2Q5ST30 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC20.01■□□□□ 0.79
VARS2Q5ST30 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
VARS2Q5ST30 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.01■□□□□ 0.79
VARS2Q5ST30 RCC2P3-201ENST00000418112 1537 ntBASIC20.01■□□□□ 0.79
VARS2Q5ST30 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
VARS2Q5ST30 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.01■□□□□ 0.79
VARS2Q5ST30 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
VARS2Q5ST30 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
VARS2Q5ST30 UBQLN4P1-201ENST00000461599 1801 ntBASIC20■□□□□ 0.79
VARS2Q5ST30 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20■□□□□ 0.79
VARS2Q5ST30 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
VARS2Q5ST30 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC20■□□□□ 0.79
VARS2Q5ST30 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC20■□□□□ 0.79
VARS2Q5ST30 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
VARS2Q5ST30 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC20■□□□□ 0.79
VARS2Q5ST30 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC20■□□□□ 0.79
VARS2Q5ST30 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC20■□□□□ 0.79
VARS2Q5ST30 AC034232.1-201ENST00000506026 1064 ntBASIC20■□□□□ 0.79
VARS2Q5ST30 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC20■□□□□ 0.79
VARS2Q5ST30 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC20■□□□□ 0.79
VARS2Q5ST30 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
VARS2Q5ST30 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC20■□□□□ 0.79
VARS2Q5ST30 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
VARS2Q5ST30 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
VARS2Q5ST30 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
VARS2Q5ST30 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC20■□□□□ 0.79
VARS2Q5ST30 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20■□□□□ 0.79
VARS2Q5ST30 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
VARS2Q5ST30 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC19.99■□□□□ 0.79
VARS2Q5ST30 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
VARS2Q5ST30 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
VARS2Q5ST30 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
VARS2Q5ST30 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
VARS2Q5ST30 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC19.99■□□□□ 0.79
VARS2Q5ST30 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
VARS2Q5ST30 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
VARS2Q5ST30 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
VARS2Q5ST30 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
VARS2Q5ST30 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
VARS2Q5ST30 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC19.99■□□□□ 0.79
VARS2Q5ST30 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC19.99■□□□□ 0.79
VARS2Q5ST30 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
VARS2Q5ST30 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
VARS2Q5ST30 AL109659.2-201ENST00000606809 1674 ntBASIC19.99■□□□□ 0.79
VARS2Q5ST30 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.99■□□□□ 0.79
VARS2Q5ST30 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
VARS2Q5ST30 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
VARS2Q5ST30 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
VARS2Q5ST30 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
VARS2Q5ST30 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
VARS2Q5ST30 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
VARS2Q5ST30 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC19.98■□□□□ 0.79
VARS2Q5ST30 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
VARS2Q5ST30 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
VARS2Q5ST30 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC19.98■□□□□ 0.79
VARS2Q5ST30 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
VARS2Q5ST30 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
VARS2Q5ST30 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
VARS2Q5ST30 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
VARS2Q5ST30 AC141586.3-201ENST00000562166 1838 ntBASIC19.98■□□□□ 0.79
VARS2Q5ST30 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
VARS2Q5ST30 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
VARS2Q5ST30 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
VARS2Q5ST30 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC19.98■□□□□ 0.79
VARS2Q5ST30 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
VARS2Q5ST30 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
VARS2Q5ST30 GRAMD4P1-201ENST00000435181 1110 ntBASIC19.98■□□□□ 0.79
VARS2Q5ST30 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC19.98■□□□□ 0.79
VARS2Q5ST30 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC19.98■□□□□ 0.79
VARS2Q5ST30 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
VARS2Q5ST30 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
VARS2Q5ST30 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
VARS2Q5ST30 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
VARS2Q5ST30 AC008556.1-201ENST00000610908 2040 ntBASIC19.98■□□□□ 0.79
VARS2Q5ST30 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
VARS2Q5ST30 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms