Protein–RNA interactions for Protein: Q59EK9

RUNDC3A, RUN domain-containing protein 3A, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3AQ59EK9 AC098934.4-201ENST00000564127 592 ntBASIC17.86■□□□□ 0.45
RUNDC3AQ59EK9 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC17.86■□□□□ 0.45
RUNDC3AQ59EK9 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
RUNDC3AQ59EK9 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC17.86■□□□□ 0.45
RUNDC3AQ59EK9 Six3os1_6.1-201ENST00000620790 196 ntBASIC17.86■□□□□ 0.45
RUNDC3AQ59EK9 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
RUNDC3AQ59EK9 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
RUNDC3AQ59EK9 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RUNDC3AQ59EK9 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
RUNDC3AQ59EK9 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RUNDC3AQ59EK9 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
RUNDC3AQ59EK9 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
RUNDC3AQ59EK9 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RUNDC3AQ59EK9 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
RUNDC3AQ59EK9 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
RUNDC3AQ59EK9 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.45
RUNDC3AQ59EK9 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RUNDC3AQ59EK9 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
RUNDC3AQ59EK9 AC068880.1-201ENST00000507289 2297 ntBASIC17.86■□□□□ 0.45
RUNDC3AQ59EK9 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RUNDC3AQ59EK9 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC17.86■□□□□ 0.45
RUNDC3AQ59EK9 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
RUNDC3AQ59EK9 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RUNDC3AQ59EK9 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RUNDC3AQ59EK9 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RUNDC3AQ59EK9 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.85■□□□□ 0.45
RUNDC3AQ59EK9 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RUNDC3AQ59EK9 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RUNDC3AQ59EK9 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.85■□□□□ 0.45
RUNDC3AQ59EK9 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RUNDC3AQ59EK9 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
RUNDC3AQ59EK9 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RUNDC3AQ59EK9 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
RUNDC3AQ59EK9 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
RUNDC3AQ59EK9 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
RUNDC3AQ59EK9 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RUNDC3AQ59EK9 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC17.85■□□□□ 0.45
RUNDC3AQ59EK9 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RUNDC3AQ59EK9 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RUNDC3AQ59EK9 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
RUNDC3AQ59EK9 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RUNDC3AQ59EK9 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RUNDC3AQ59EK9 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC17.85■□□□□ 0.45
RUNDC3AQ59EK9 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RUNDC3AQ59EK9 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC17.85■□□□□ 0.45
RUNDC3AQ59EK9 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
RUNDC3AQ59EK9 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC17.85■□□□□ 0.45
RUNDC3AQ59EK9 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC17.85■□□□□ 0.45
RUNDC3AQ59EK9 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
RUNDC3AQ59EK9 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC17.85■□□□□ 0.45
RUNDC3AQ59EK9 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RUNDC3AQ59EK9 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.85■□□□□ 0.45
RUNDC3AQ59EK9 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RUNDC3AQ59EK9 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC17.85■□□□□ 0.45
RUNDC3AQ59EK9 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RUNDC3AQ59EK9 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC17.85■□□□□ 0.45
RUNDC3AQ59EK9 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC17.85■□□□□ 0.45
RUNDC3AQ59EK9 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.85■□□□□ 0.45
RUNDC3AQ59EK9 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
RUNDC3AQ59EK9 PCDHB18P-201ENST00000524813 2368 ntBASIC17.84■□□□□ 0.45
RUNDC3AQ59EK9 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC17.84■□□□□ 0.45
RUNDC3AQ59EK9 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.84■□□□□ 0.45
RUNDC3AQ59EK9 HEIH-201ENST00000623091 1652 ntBASIC17.84■□□□□ 0.45
RUNDC3AQ59EK9 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RUNDC3AQ59EK9 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RUNDC3AQ59EK9 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
RUNDC3AQ59EK9 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
RUNDC3AQ59EK9 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
RUNDC3AQ59EK9 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC17.84■□□□□ 0.45
RUNDC3AQ59EK9 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RUNDC3AQ59EK9 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RUNDC3AQ59EK9 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RUNDC3AQ59EK9 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
RUNDC3AQ59EK9 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
RUNDC3AQ59EK9 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RUNDC3AQ59EK9 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC17.84■□□□□ 0.45
RUNDC3AQ59EK9 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC17.84■□□□□ 0.45
RUNDC3AQ59EK9 UNC93B4-201ENST00000505679 747 ntBASIC17.84■□□□□ 0.45
RUNDC3AQ59EK9 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC17.84■□□□□ 0.45
RUNDC3AQ59EK9 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC17.84■□□□□ 0.45
RUNDC3AQ59EK9 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC17.84■□□□□ 0.45
RUNDC3AQ59EK9 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC17.84■□□□□ 0.45
RUNDC3AQ59EK9 AL138781.1-201ENST00000566567 1274 ntBASIC17.84■□□□□ 0.45
RUNDC3AQ59EK9 C1QL1P1-201ENST00000568105 661 ntBASIC17.84■□□□□ 0.45
RUNDC3AQ59EK9 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RUNDC3AQ59EK9 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RUNDC3AQ59EK9 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
RUNDC3AQ59EK9 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RUNDC3AQ59EK9 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
RUNDC3AQ59EK9 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RUNDC3AQ59EK9 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
RUNDC3AQ59EK9 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RUNDC3AQ59EK9 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RUNDC3AQ59EK9 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC17.84■□□□□ 0.45
RUNDC3AQ59EK9 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RUNDC3AQ59EK9 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RUNDC3AQ59EK9 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RUNDC3AQ59EK9 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
RUNDC3AQ59EK9 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
RUNDC3AQ59EK9 AL162741.1-201ENST00000565563 1558 ntBASIC17.83■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms