Protein–RNA interactions for Protein: Q4G0U5

CFAP221, Cilia- and flagella-associated protein 221, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP221Q4G0U5 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CFAP221Q4G0U5 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
CFAP221Q4G0U5 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
CFAP221Q4G0U5 AL161938.1-201ENST00000569833 2180 ntBASIC20.58■□□□□ 0.88
CFAP221Q4G0U5 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CFAP221Q4G0U5 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CFAP221Q4G0U5 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CFAP221Q4G0U5 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CFAP221Q4G0U5 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
CFAP221Q4G0U5 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
CFAP221Q4G0U5 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
CFAP221Q4G0U5 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CFAP221Q4G0U5 MMP23A-201ENST00000234610 1017 ntBASIC20.57■□□□□ 0.88
CFAP221Q4G0U5 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CFAP221Q4G0U5 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CFAP221Q4G0U5 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CFAP221Q4G0U5 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CFAP221Q4G0U5 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
CFAP221Q4G0U5 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC20.57■□□□□ 0.88
CFAP221Q4G0U5 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CFAP221Q4G0U5 B3GAT3P1-201ENST00000471720 806 ntBASIC20.57■□□□□ 0.88
CFAP221Q4G0U5 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC20.57■□□□□ 0.88
CFAP221Q4G0U5 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CFAP221Q4G0U5 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC20.57■□□□□ 0.88
CFAP221Q4G0U5 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC20.57■□□□□ 0.88
CFAP221Q4G0U5 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC20.57■□□□□ 0.88
CFAP221Q4G0U5 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC20.57■□□□□ 0.88
CFAP221Q4G0U5 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CFAP221Q4G0U5 LINC01023-201ENST00000606054 436 ntBASIC20.57■□□□□ 0.88
CFAP221Q4G0U5 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC20.57■□□□□ 0.88
CFAP221Q4G0U5 MIR6786-201ENST00000616843 113 ntBASIC20.57■□□□□ 0.88
CFAP221Q4G0U5 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
CFAP221Q4G0U5 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC20.57■□□□□ 0.88
CFAP221Q4G0U5 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
CFAP221Q4G0U5 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CFAP221Q4G0U5 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC20.56■□□□□ 0.88
CFAP221Q4G0U5 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CFAP221Q4G0U5 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CFAP221Q4G0U5 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CFAP221Q4G0U5 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CFAP221Q4G0U5 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CFAP221Q4G0U5 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC20.56■□□□□ 0.88
CFAP221Q4G0U5 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
CFAP221Q4G0U5 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC20.56■□□□□ 0.88
CFAP221Q4G0U5 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CFAP221Q4G0U5 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CFAP221Q4G0U5 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC20.56■□□□□ 0.88
CFAP221Q4G0U5 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC20.56■□□□□ 0.88
CFAP221Q4G0U5 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC20.56■□□□□ 0.88
CFAP221Q4G0U5 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CFAP221Q4G0U5 AP000525.1-201ENST00000608286 694 ntBASIC20.56■□□□□ 0.88
CFAP221Q4G0U5 AC012306.2-201ENST00000609350 630 ntBASIC20.56■□□□□ 0.88
CFAP221Q4G0U5 DGCR10-201ENST00000609839 495 ntBASIC20.56■□□□□ 0.88
CFAP221Q4G0U5 GLDC-219ENST00000640208 420 ntTSL 2 BASIC20.56■□□□□ 0.88
CFAP221Q4G0U5 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CFAP221Q4G0U5 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CFAP221Q4G0U5 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC20.56■□□□□ 0.88
CFAP221Q4G0U5 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CFAP221Q4G0U5 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CFAP221Q4G0U5 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CFAP221Q4G0U5 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
CFAP221Q4G0U5 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CFAP221Q4G0U5 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CFAP221Q4G0U5 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CFAP221Q4G0U5 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CFAP221Q4G0U5 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CFAP221Q4G0U5 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
CFAP221Q4G0U5 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
CFAP221Q4G0U5 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC20.55■□□□□ 0.88
CFAP221Q4G0U5 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CFAP221Q4G0U5 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
CFAP221Q4G0U5 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CFAP221Q4G0U5 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
CFAP221Q4G0U5 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CFAP221Q4G0U5 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CFAP221Q4G0U5 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC20.55■□□□□ 0.88
CFAP221Q4G0U5 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
CFAP221Q4G0U5 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
CFAP221Q4G0U5 ECEL1P3-201ENST00000427961 737 ntBASIC20.55■□□□□ 0.88
CFAP221Q4G0U5 PTPA-216ENST00000432651 857 ntTSL 2 BASIC20.55■□□□□ 0.88
CFAP221Q4G0U5 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC20.55■□□□□ 0.88
CFAP221Q4G0U5 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
CFAP221Q4G0U5 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC20.55■□□□□ 0.88
CFAP221Q4G0U5 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC20.55■□□□□ 0.88
CFAP221Q4G0U5 AC097493.4-201ENST00000641197 219 ntBASIC20.55■□□□□ 0.88
CFAP221Q4G0U5 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC20.55■□□□□ 0.88
CFAP221Q4G0U5 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CFAP221Q4G0U5 AC026471.1-201ENST00000564629 3026 ntBASIC20.55■□□□□ 0.88
CFAP221Q4G0U5 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CFAP221Q4G0U5 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CFAP221Q4G0U5 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CFAP221Q4G0U5 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
CFAP221Q4G0U5 AC138932.1-201ENST00000534164 6830 ntBASIC20.55■□□□□ 0.88
CFAP221Q4G0U5 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC20.55■□□□□ 0.88
CFAP221Q4G0U5 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
CFAP221Q4G0U5 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CFAP221Q4G0U5 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
CFAP221Q4G0U5 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CFAP221Q4G0U5 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
CFAP221Q4G0U5 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms