Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CCNA1P78396 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
CCNA1P78396 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CCNA1P78396 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC21.48■■□□□ 1.03
CCNA1P78396 KATNBL1P6-202ENST00000562413 1466 ntBASIC21.48■■□□□ 1.03
CCNA1P78396 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CCNA1P78396 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC21.48■■□□□ 1.03
CCNA1P78396 AC104390.1-201ENST00000555663 520 ntBASIC21.48■■□□□ 1.03
CCNA1P78396 TPSP2-201ENST00000561760 610 ntBASIC21.48■■□□□ 1.03
CCNA1P78396 IFNL4P1-201ENST00000607083 540 ntBASIC21.48■■□□□ 1.03
CCNA1P78396 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
CCNA1P78396 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC21.48■■□□□ 1.03
CCNA1P78396 RCC2P3-201ENST00000418112 1537 ntBASIC21.48■■□□□ 1.03
CCNA1P78396 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC21.48■■□□□ 1.03
CCNA1P78396 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CCNA1P78396 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
CCNA1P78396 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
CCNA1P78396 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
CCNA1P78396 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
CCNA1P78396 Z82202.1-201ENST00000623446 1880 ntBASIC21.47■■□□□ 1.03
CCNA1P78396 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
CCNA1P78396 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CCNA1P78396 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CCNA1P78396 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC21.47■■□□□ 1.03
CCNA1P78396 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CCNA1P78396 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CCNA1P78396 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CCNA1P78396 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CCNA1P78396 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
CCNA1P78396 LINC00265-3P-201ENST00000447588 903 ntBASIC21.47■■□□□ 1.03
CCNA1P78396 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC21.47■■□□□ 1.03
CCNA1P78396 AP000867.3-201ENST00000524675 377 ntBASIC21.47■■□□□ 1.03
CCNA1P78396 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CCNA1P78396 CIB2-208ENST00000560618 804 ntTSL 2 BASIC21.47■■□□□ 1.03
CCNA1P78396 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC21.47■■□□□ 1.03
CCNA1P78396 AC010240.3-201ENST00000607688 395 ntBASIC21.47■■□□□ 1.03
CCNA1P78396 LITAF-220ENST00000620789 692 ntTSL 5 BASIC21.47■■□□□ 1.03
CCNA1P78396 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CCNA1P78396 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CCNA1P78396 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC21.47■■□□□ 1.03
CCNA1P78396 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC21.47■■□□□ 1.03
CCNA1P78396 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CCNA1P78396 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CCNA1P78396 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC21.47■■□□□ 1.03
CCNA1P78396 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
CCNA1P78396 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CCNA1P78396 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC21.46■■□□□ 1.03
CCNA1P78396 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CCNA1P78396 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CCNA1P78396 ENSA-205ENST00000361532 792 ntTSL 2 BASIC21.46■■□□□ 1.03
CCNA1P78396 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC21.46■■□□□ 1.03
CCNA1P78396 TSPY19P-201ENST00000418461 509 ntBASIC21.46■■□□□ 1.03
CCNA1P78396 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC21.46■■□□□ 1.03
CCNA1P78396 TSPY18P-201ENST00000441642 509 ntBASIC21.46■■□□□ 1.03
CCNA1P78396 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC21.46■■□□□ 1.03
CCNA1P78396 PNN-202ENST00000553331 656 ntTSL 3 BASIC21.46■■□□□ 1.03
CCNA1P78396 AC012615.1-201ENST00000565797 1299 ntBASIC21.46■■□□□ 1.03
CCNA1P78396 RNF126P1-202ENST00000569893 925 ntBASIC21.46■■□□□ 1.03
CCNA1P78396 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
CCNA1P78396 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC21.46■■□□□ 1.03
CCNA1P78396 AL512353.2-201ENST00000448759 1962 ntBASIC21.46■■□□□ 1.03
CCNA1P78396 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
CCNA1P78396 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC21.46■■□□□ 1.03
CCNA1P78396 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CCNA1P78396 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC21.46■■□□□ 1.03
CCNA1P78396 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CCNA1P78396 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
CCNA1P78396 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CCNA1P78396 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CCNA1P78396 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CCNA1P78396 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CCNA1P78396 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CCNA1P78396 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CCNA1P78396 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CCNA1P78396 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
CCNA1P78396 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CCNA1P78396 AC091304.2-201ENST00000564639 760 ntBASIC21.45■■□□□ 1.02
CCNA1P78396 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC21.45■■□□□ 1.02
CCNA1P78396 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC21.45■■□□□ 1.02
CCNA1P78396 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC21.45■■□□□ 1.02
CCNA1P78396 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CCNA1P78396 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CCNA1P78396 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
CCNA1P78396 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC21.45■■□□□ 1.02
CCNA1P78396 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC21.45■■□□□ 1.02
CCNA1P78396 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC21.44■■□□□ 1.02
CCNA1P78396 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
CCNA1P78396 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CCNA1P78396 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CCNA1P78396 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CCNA1P78396 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CCNA1P78396 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CCNA1P78396 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CCNA1P78396 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CCNA1P78396 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CCNA1P78396 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC21.44■■□□□ 1.02
CCNA1P78396 AC090616.6-201ENST00000582640 721 ntBASIC21.44■■□□□ 1.02
CCNA1P78396 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC21.44■■□□□ 1.02
CCNA1P78396 AC008556.1-201ENST00000610908 2040 ntBASIC21.44■■□□□ 1.02
CCNA1P78396 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC21.44■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms