Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 AL596275.1-201ENST00000423464 877 ntBASIC16.53■□□□□ 0.24
SEC61A1P61619 AC133681.1-201ENST00000465482 601 ntBASIC16.53■□□□□ 0.24
SEC61A1P61619 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC16.53■□□□□ 0.24
SEC61A1P61619 PRKY-204ENST00000533551 1019 ntBASIC16.53■□□□□ 0.24
SEC61A1P61619 AL121829.2-201ENST00000620908 328 ntBASIC16.53■□□□□ 0.24
SEC61A1P61619 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC16.53■□□□□ 0.24
SEC61A1P61619 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
SEC61A1P61619 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC16.53■□□□□ 0.24
SEC61A1P61619 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
SEC61A1P61619 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SEC61A1P61619 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SEC61A1P61619 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SEC61A1P61619 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
SEC61A1P61619 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
SEC61A1P61619 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SEC61A1P61619 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC16.53■□□□□ 0.24
SEC61A1P61619 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC16.53■□□□□ 0.24
SEC61A1P61619 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
SEC61A1P61619 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SEC61A1P61619 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SEC61A1P61619 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC16.53■□□□□ 0.24
SEC61A1P61619 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SEC61A1P61619 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
SEC61A1P61619 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.52■□□□□ 0.24
SEC61A1P61619 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
SEC61A1P61619 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SEC61A1P61619 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
SEC61A1P61619 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SEC61A1P61619 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC16.52■□□□□ 0.24
SEC61A1P61619 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC16.52■□□□□ 0.24
SEC61A1P61619 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
SEC61A1P61619 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SEC61A1P61619 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
SEC61A1P61619 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC16.52■□□□□ 0.24
SEC61A1P61619 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SEC61A1P61619 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SEC61A1P61619 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC16.52■□□□□ 0.24
SEC61A1P61619 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SEC61A1P61619 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
SEC61A1P61619 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC16.52■□□□□ 0.24
SEC61A1P61619 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC16.52■□□□□ 0.24
SEC61A1P61619 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC16.52■□□□□ 0.24
SEC61A1P61619 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC16.52■□□□□ 0.24
SEC61A1P61619 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC16.52■□□□□ 0.24
SEC61A1P61619 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC16.52■□□□□ 0.24
SEC61A1P61619 Z99916.2-201ENST00000604037 246 ntBASIC16.52■□□□□ 0.24
SEC61A1P61619 AC110285.5-201ENST00000611501 352 ntBASIC16.52■□□□□ 0.24
SEC61A1P61619 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.52■□□□□ 0.24
SEC61A1P61619 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
SEC61A1P61619 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SEC61A1P61619 TP73-202ENST00000354437 2140 ntTSL 5 BASIC16.52■□□□□ 0.23
SEC61A1P61619 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
SEC61A1P61619 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
SEC61A1P61619 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SEC61A1P61619 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC16.52■□□□□ 0.23
SEC61A1P61619 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC16.52■□□□□ 0.23
SEC61A1P61619 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
SEC61A1P61619 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SEC61A1P61619 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
SEC61A1P61619 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
SEC61A1P61619 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SEC61A1P61619 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SEC61A1P61619 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SEC61A1P61619 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SEC61A1P61619 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SEC61A1P61619 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC16.51■□□□□ 0.23
SEC61A1P61619 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SEC61A1P61619 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
SEC61A1P61619 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.51■□□□□ 0.23
SEC61A1P61619 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC16.51■□□□□ 0.23
SEC61A1P61619 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
SEC61A1P61619 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
SEC61A1P61619 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
SEC61A1P61619 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
SEC61A1P61619 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SEC61A1P61619 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SEC61A1P61619 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC16.51■□□□□ 0.23
SEC61A1P61619 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SEC61A1P61619 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SEC61A1P61619 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC16.51■□□□□ 0.23
SEC61A1P61619 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SEC61A1P61619 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SEC61A1P61619 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC16.51■□□□□ 0.23
SEC61A1P61619 AL121906.2-201ENST00000621597 723 ntBASIC16.51■□□□□ 0.23
SEC61A1P61619 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
SEC61A1P61619 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SEC61A1P61619 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SEC61A1P61619 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SEC61A1P61619 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SEC61A1P61619 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SEC61A1P61619 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC16.51■□□□□ 0.23
SEC61A1P61619 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
SEC61A1P61619 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
SEC61A1P61619 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
SEC61A1P61619 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SEC61A1P61619 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
SEC61A1P61619 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC16.51■□□□□ 0.23
SEC61A1P61619 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SEC61A1P61619 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC16.5■□□□□ 0.23
SEC61A1P61619 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms