Protein–RNA interactions for Protein: P60468

SEC61B, Protein transport protein Sec61 subunit beta, humanhuman

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61BP60468 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
SEC61BP60468 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
SEC61BP60468 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
SEC61BP60468 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC10.14□□□□□ -0.79
SEC61BP60468 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
SEC61BP60468 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC10.14□□□□□ -0.79
SEC61BP60468 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC10.14□□□□□ -0.79
SEC61BP60468 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC10.14□□□□□ -0.79
SEC61BP60468 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC10.14□□□□□ -0.79
SEC61BP60468 CD81-212ENST00000526072 1172 ntTSL 5 BASIC10.14□□□□□ -0.79
SEC61BP60468 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC10.14□□□□□ -0.79
SEC61BP60468 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC10.14□□□□□ -0.79
SEC61BP60468 MIR3180-5-201ENST00000583743 153 ntBASIC10.14□□□□□ -0.79
SEC61BP60468 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC10.14□□□□□ -0.79
SEC61BP60468 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
SEC61BP60468 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC10.14□□□□□ -0.79
SEC61BP60468 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
SEC61BP60468 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
SEC61BP60468 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
SEC61BP60468 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC10.14□□□□□ -0.79
SEC61BP60468 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
SEC61BP60468 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
SEC61BP60468 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC10.14□□□□□ -0.79
SEC61BP60468 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC10.14□□□□□ -0.79
SEC61BP60468 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
SEC61BP60468 AL512408.1-201ENST00000569378 2000 ntBASIC10.14□□□□□ -0.79
SEC61BP60468 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
SEC61BP60468 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC10.14□□□□□ -0.79
SEC61BP60468 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
SEC61BP60468 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
SEC61BP60468 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC10.14□□□□□ -0.79
SEC61BP60468 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
SEC61BP60468 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC10.14□□□□□ -0.79
SEC61BP60468 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
SEC61BP60468 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
SEC61BP60468 KC6-207ENST00000600644 2311 ntTSL 3 BASIC10.13□□□□□ -0.79
SEC61BP60468 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC10.13□□□□□ -0.79
SEC61BP60468 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
SEC61BP60468 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
SEC61BP60468 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC10.13□□□□□ -0.79
SEC61BP60468 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC10.13□□□□□ -0.79
SEC61BP60468 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC10.13□□□□□ -0.79
SEC61BP60468 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC10.13□□□□□ -0.79
SEC61BP60468 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
SEC61BP60468 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
SEC61BP60468 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC10.13□□□□□ -0.79
SEC61BP60468 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC10.13□□□□□ -0.79
SEC61BP60468 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC10.13□□□□□ -0.79
SEC61BP60468 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
SEC61BP60468 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC10.13□□□□□ -0.79
SEC61BP60468 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
SEC61BP60468 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC10.13□□□□□ -0.79
SEC61BP60468 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
SEC61BP60468 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
SEC61BP60468 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
SEC61BP60468 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
SEC61BP60468 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC10.13□□□□□ -0.79
SEC61BP60468 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC10.13□□□□□ -0.79
SEC61BP60468 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC10.13□□□□□ -0.79
SEC61BP60468 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
SEC61BP60468 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
SEC61BP60468 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
SEC61BP60468 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC10.13□□□□□ -0.79
SEC61BP60468 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC10.13□□□□□ -0.79
SEC61BP60468 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC10.13□□□□□ -0.79
SEC61BP60468 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC10.13□□□□□ -0.79
SEC61BP60468 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC10.13□□□□□ -0.79
SEC61BP60468 AL450487.1-201ENST00000426799 995 ntBASIC10.13□□□□□ -0.79
SEC61BP60468 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC10.13□□□□□ -0.79
SEC61BP60468 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC10.13□□□□□ -0.79
SEC61BP60468 TSPY23P-201ENST00000440136 739 ntBASIC10.13□□□□□ -0.79
SEC61BP60468 KRT18P38-201ENST00000449496 1282 ntBASIC10.13□□□□□ -0.79
SEC61BP60468 RASA4DP-201ENST00000460726 1199 ntBASIC10.13□□□□□ -0.79
SEC61BP60468 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC10.13□□□□□ -0.79
SEC61BP60468 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC10.13□□□□□ -0.79
SEC61BP60468 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC10.13□□□□□ -0.79
SEC61BP60468 TOLLIP-AS1-201ENST00000530897 939 ntBASIC10.13□□□□□ -0.79
SEC61BP60468 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC10.13□□□□□ -0.79
SEC61BP60468 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC10.13□□□□□ -0.79
SEC61BP60468 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC10.13□□□□□ -0.79
SEC61BP60468 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC10.13□□□□□ -0.79
SEC61BP60468 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC10.13□□□□□ -0.79
SEC61BP60468 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC10.13□□□□□ -0.79
SEC61BP60468 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
SEC61BP60468 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC10.13□□□□□ -0.79
SEC61BP60468 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC10.13□□□□□ -0.79
SEC61BP60468 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC10.13□□□□□ -0.79
SEC61BP60468 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC10.13□□□□□ -0.79
SEC61BP60468 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
SEC61BP60468 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC10.13□□□□□ -0.79
SEC61BP60468 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
SEC61BP60468 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC10.13□□□□□ -0.79
SEC61BP60468 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC10.13□□□□□ -0.79
SEC61BP60468 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
SEC61BP60468 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC10.13□□□□□ -0.79
SEC61BP60468 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC10.13□□□□□ -0.79
SEC61BP60468 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC10.13□□□□□ -0.79
SEC61BP60468 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
SEC61BP60468 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
SEC61BP60468 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms