Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
CDH13P55290 KRASP1-201ENST00000407852 552 ntBASIC18.5■□□□□ 0.55
CDH13P55290 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDH13P55290 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDH13P55290 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC18.5■□□□□ 0.55
CDH13P55290 MMAB-206ENST00000540016 945 ntTSL 3 BASIC18.5■□□□□ 0.55
CDH13P55290 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC18.5■□□□□ 0.55
CDH13P55290 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC18.5■□□□□ 0.55
CDH13P55290 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CDH13P55290 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CDH13P55290 AC135050.7-201ENST00000624508 2218 ntBASIC18.5■□□□□ 0.55
CDH13P55290 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
CDH13P55290 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CDH13P55290 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDH13P55290 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.5■□□□□ 0.55
CDH13P55290 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CDH13P55290 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDH13P55290 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.49■□□□□ 0.55
CDH13P55290 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CDH13P55290 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDH13P55290 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDH13P55290 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDH13P55290 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
CDH13P55290 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDH13P55290 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CDH13P55290 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CDH13P55290 COBL-210ENST00000632460 1941 ntTSL 5 BASIC18.49■□□□□ 0.55
CDH13P55290 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.49■□□□□ 0.55
CDH13P55290 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDH13P55290 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CDH13P55290 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.49■□□□□ 0.55
CDH13P55290 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
CDH13P55290 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
CDH13P55290 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC18.49■□□□□ 0.55
CDH13P55290 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CDH13P55290 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC18.49■□□□□ 0.55
CDH13P55290 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDH13P55290 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC18.49■□□□□ 0.55
CDH13P55290 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDH13P55290 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC18.49■□□□□ 0.55
CDH13P55290 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC18.49■□□□□ 0.55
CDH13P55290 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
CDH13P55290 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CDH13P55290 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC18.49■□□□□ 0.55
CDH13P55290 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC18.49■□□□□ 0.55
CDH13P55290 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC18.49■□□□□ 0.55
CDH13P55290 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC18.49■□□□□ 0.55
CDH13P55290 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.49■□□□□ 0.55
CDH13P55290 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDH13P55290 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.49■□□□□ 0.55
CDH13P55290 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CDH13P55290 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDH13P55290 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.49■□□□□ 0.55
CDH13P55290 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDH13P55290 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
CDH13P55290 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDH13P55290 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDH13P55290 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDH13P55290 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDH13P55290 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
CDH13P55290 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CDH13P55290 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDH13P55290 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC18.48■□□□□ 0.55
CDH13P55290 AC239809.2-201ENST00000415381 517 ntBASIC18.48■□□□□ 0.55
CDH13P55290 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC18.48■□□□□ 0.55
CDH13P55290 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC18.48■□□□□ 0.55
CDH13P55290 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC18.48■□□□□ 0.55
CDH13P55290 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
CDH13P55290 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.48■□□□□ 0.55
CDH13P55290 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC18.48■□□□□ 0.55
CDH13P55290 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CDH13P55290 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC18.48■□□□□ 0.55
CDH13P55290 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDH13P55290 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.48■□□□□ 0.55
CDH13P55290 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDH13P55290 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC18.48■□□□□ 0.55
CDH13P55290 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC18.48■□□□□ 0.55
CDH13P55290 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.48■□□□□ 0.55
CDH13P55290 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
CDH13P55290 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDH13P55290 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDH13P55290 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.48■□□□□ 0.55
CDH13P55290 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDH13P55290 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDH13P55290 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.47■□□□□ 0.55
CDH13P55290 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDH13P55290 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CDH13P55290 AL390961.4-201ENST00000623958 2535 ntBASIC18.47■□□□□ 0.55
CDH13P55290 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC18.47■□□□□ 0.55
CDH13P55290 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC18.47■□□□□ 0.55
CDH13P55290 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDH13P55290 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CDH13P55290 LY6E-205ENST00000519611 635 ntTSL 3 BASIC18.47■□□□□ 0.55
CDH13P55290 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC18.47■□□□□ 0.55
CDH13P55290 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC18.47■□□□□ 0.55
CDH13P55290 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDH13P55290 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDH13P55290 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.47■□□□□ 0.55
CDH13P55290 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
CDH13P55290 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms