Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.75■□□□□ 0.75
EPHB3P54753 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC19.75■□□□□ 0.75
EPHB3P54753 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.75■□□□□ 0.75
EPHB3P54753 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.74■□□□□ 0.75
EPHB3P54753 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
EPHB3P54753 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
EPHB3P54753 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
EPHB3P54753 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
EPHB3P54753 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
EPHB3P54753 HBZP1-201ENST00000354915 429 ntBASIC19.74■□□□□ 0.75
EPHB3P54753 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC19.74■□□□□ 0.75
EPHB3P54753 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
EPHB3P54753 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC19.74■□□□□ 0.75
EPHB3P54753 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC19.74■□□□□ 0.75
EPHB3P54753 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC19.74■□□□□ 0.75
EPHB3P54753 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC19.74■□□□□ 0.75
EPHB3P54753 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
EPHB3P54753 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC19.74■□□□□ 0.75
EPHB3P54753 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC19.74■□□□□ 0.75
EPHB3P54753 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
EPHB3P54753 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC19.74■□□□□ 0.75
EPHB3P54753 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC19.74■□□□□ 0.75
EPHB3P54753 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
EPHB3P54753 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
EPHB3P54753 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
EPHB3P54753 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
EPHB3P54753 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.74■□□□□ 0.75
EPHB3P54753 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
EPHB3P54753 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
EPHB3P54753 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC19.74■□□□□ 0.75
EPHB3P54753 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
EPHB3P54753 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
EPHB3P54753 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
EPHB3P54753 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC19.74■□□□□ 0.75
EPHB3P54753 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
EPHB3P54753 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
EPHB3P54753 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
EPHB3P54753 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.73■□□□□ 0.75
EPHB3P54753 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.73■□□□□ 0.75
EPHB3P54753 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
EPHB3P54753 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
EPHB3P54753 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
EPHB3P54753 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC19.73■□□□□ 0.75
EPHB3P54753 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC19.73■□□□□ 0.75
EPHB3P54753 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC19.73■□□□□ 0.75
EPHB3P54753 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
EPHB3P54753 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC19.73■□□□□ 0.75
EPHB3P54753 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC19.73■□□□□ 0.75
EPHB3P54753 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
EPHB3P54753 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
EPHB3P54753 FEM1AP3-201ENST00000403722 1741 ntBASIC19.73■□□□□ 0.75
EPHB3P54753 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
EPHB3P54753 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
EPHB3P54753 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
EPHB3P54753 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
EPHB3P54753 RCC2P3-201ENST00000418112 1537 ntBASIC19.72■□□□□ 0.75
EPHB3P54753 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
EPHB3P54753 AL109659.2-201ENST00000606809 1674 ntBASIC19.72■□□□□ 0.75
EPHB3P54753 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC19.72■□□□□ 0.75
EPHB3P54753 AL512353.2-201ENST00000448759 1962 ntBASIC19.72■□□□□ 0.75
EPHB3P54753 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.72■□□□□ 0.75
EPHB3P54753 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC19.72■□□□□ 0.75
EPHB3P54753 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
EPHB3P54753 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
EPHB3P54753 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
EPHB3P54753 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC19.72■□□□□ 0.75
EPHB3P54753 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
EPHB3P54753 AC092597.1-201ENST00000487352 616 ntBASIC19.72■□□□□ 0.75
EPHB3P54753 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC19.72■□□□□ 0.75
EPHB3P54753 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC19.72■□□□□ 0.75
EPHB3P54753 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
EPHB3P54753 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
EPHB3P54753 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC19.72■□□□□ 0.75
EPHB3P54753 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.72■□□□□ 0.75
EPHB3P54753 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
EPHB3P54753 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC19.72■□□□□ 0.75
EPHB3P54753 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
EPHB3P54753 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
EPHB3P54753 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
EPHB3P54753 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
EPHB3P54753 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
EPHB3P54753 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
EPHB3P54753 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
EPHB3P54753 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC19.71■□□□□ 0.75
EPHB3P54753 SEC1P-202ENST00000473944 940 ntBASIC19.71■□□□□ 0.75
EPHB3P54753 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC19.71■□□□□ 0.75
EPHB3P54753 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC19.71■□□□□ 0.75
EPHB3P54753 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC19.71■□□□□ 0.75
EPHB3P54753 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
EPHB3P54753 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
EPHB3P54753 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
EPHB3P54753 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
EPHB3P54753 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
EPHB3P54753 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
EPHB3P54753 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
EPHB3P54753 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
EPHB3P54753 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
EPHB3P54753 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
EPHB3P54753 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC19.7■□□□□ 0.74
EPHB3P54753 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms