Protein–RNA interactions for Protein: P52298

NCBP2, Nuclear cap-binding protein subunit 2, humanhuman

Known RBP eCLIP

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP2P52298 TCF25-207ENST00000562256 1879 ntTSL 1 (best)17.27■□□□□ 0.367e-7■■□□□ 13
NCBP2P52298 SRRM2-218ENST00000574331 1759 ntTSL 216.66■□□□□ 0.262e-13■■□□□ 13
NCBP2P52298 SRRM2-228ENST00000576878 1141 ntTSL 216.21■□□□□ 0.192e-13■■□□□ 13
NCBP2P52298 CD81-205ENST00000475945 606 ntTSL 215.75■□□□□ 0.117e-7■■□□□ 13
NCBP2P52298 BSDC1-202ENST00000373520 1630 ntTSL 215.54■□□□□ 0.087e-7■■□□□ 13
NCBP2P52298 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -07e-7■■□□□ 13
NCBP2P52298 TCF25-226ENST00000640279 2688 ntTSL 514.92□□□□□ -0.027e-7■■□□□ 13
NCBP2P52298 TCF25-222ENST00000568412 797 ntTSL 314.84□□□□□ -0.037e-7■■□□□ 13
NCBP2P52298 TCF25-204ENST00000561958 763 ntTSL 314.84□□□□□ -0.037e-7■■□□□ 13
NCBP2P52298 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC14.84□□□□□ -0.037e-7■■□□□ 13
NCBP2P52298 RHOT2-213ENST00000565004 1014 ntTSL 514.29□□□□□ -0.127e-7■■□□□ 13
NCBP2P52298 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.127e-7■■□□□ 13
NCBP2P52298 SRRM2-204ENST00000570705 675 ntTSL 314.14□□□□□ -0.152e-13■■□□□ 13
NCBP2P52298 SRRM2-206ENST00000571041 498 ntTSL 413.83□□□□□ -0.22e-13■■□□□ 13
NCBP2P52298 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC13.73□□□□□ -0.217e-7■■□□□ 13
NCBP2P52298 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC13.46□□□□□ -0.257e-7■■□□□ 13
NCBP2P52298 CD81-215ENST00000530648 558 ntTSL 413.08□□□□□ -0.327e-7■■□□□ 13
NCBP2P52298 TCF25-221ENST00000568409 857 ntTSL 313.01□□□□□ -0.337e-7■■□□□ 13
NCBP2P52298 TCF25-223ENST00000568870 263 ntTSL 213.01□□□□□ -0.337e-7■■□□□ 13
NCBP2P52298 MIIP-206ENST00000492256 806 ntTSL 212.72□□□□□ -0.377e-7■■□□□ 13
NCBP2P52298 BSDC1-201ENST00000341071 4599 ntTSL 2 BASIC12.58□□□□□ -0.47e-7■■□□□ 13
NCBP2P52298 BSDC1-209ENST00000526031 1361 ntTSL 2 BASIC12.03□□□□□ -0.487e-7■■□□□ 13
NCBP2P52298 BSDC1-207ENST00000463967 616 ntTSL 311.84□□□□□ -0.517e-7■■□□□ 13
NCBP2P52298 BSDC1-206ENST00000455895 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.577e-7■■□□□ 13
NCBP2P52298 BSDC1-204ENST00000444377 2925 ntTSL 1 (best)9.82□□□□□ -0.847e-7■■□□□ 13
NCBP2P52298 TCF25-219ENST00000566751 383 ntTSL 57.57□□□□□ -1.27e-7■■□□□ 13
NCBP2P52298 BIRC2-210ENST00000533742 720 ntTSL 219.68■□□□□ 0.741e-7■■□□□ 13
NCBP2P52298 BIRC2-209ENST00000532832 505 ntTSL 218.97■□□□□ 0.631e-7■■□□□ 13
NCBP2P52298 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.31■□□□□ 0.521e-7■■□□□ 13
NCBP2P52298 BIRC2-212ENST00000534646 562 ntTSL 417.37■□□□□ 0.371e-7■■□□□ 13
NCBP2P52298 BIRC2-203ENST00000527808 709 ntTSL 217.34■□□□□ 0.371e-7■■□□□ 13
NCBP2P52298 BIRC2-207ENST00000531259 572 ntTSL 514.37□□□□□ -0.111e-7■■□□□ 13
NCBP2P52298 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.291e-7■■□□□ 13
NCBP2P52298 BIRC2-201ENST00000227758 3743 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.731e-7■■□□□ 13
NCBP2P52298 BIRC2-202ENST00000527465 595 ntTSL 49.43□□□□□ -0.91e-7■■□□□ 13
NCBP2P52298 SLC47A1-208ENST00000574596 1755 nt19.46■□□□□ 0.711e-7■■□□□ 13
NCBP2P52298 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC18.03■□□□□ 0.481e-7■■□□□ 13
NCBP2P52298 SLC47A1-205ENST00000497548 1900 ntTSL 216.52■□□□□ 0.231e-7■■□□□ 13
NCBP2P52298 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC16.21■□□□□ 0.181e-7■■□□□ 13
NCBP2P52298 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC14.84□□□□□ -0.031e-7■■□□□ 13
NCBP2P52298 SLC47A1-212ENST00000576095 548 ntTSL 414.23□□□□□ -0.131e-7■■□□□ 13
NCBP2P52298 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC13.15□□□□□ -0.31e-7■■□□□ 13
NCBP2P52298 SLC47A1-201ENST00000270570 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.411e-7■■□□□ 13
NCBP2P52298 SLC47A1-214ENST00000584348 603 ntTSL 39.95□□□□□ -0.821e-7■■□□□ 13
NCBP2P52298 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.451e-13■■□□□ 13
NCBP2P52298 ARID1A-204ENST00000430799 6521 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.691e-13■■□□□ 13
NCBP2P52298 ARID1A-216ENST00000637465 699 ntTSL 53.84□□□□□ -1.791e-13■■□□□ 13
NCBP2P52298 SCFD1-224ENST00000557713 556 ntTSL 414.35□□□□□ -0.116e-13■■□□□ 13
NCBP2P52298 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.286e-13■■□□□ 13
NCBP2P52298 SCFD1-201ENST00000311943 2016 ntTSL 211.12□□□□□ -0.636e-13■■□□□ 13
NCBP2P52298 SCFD1-206ENST00000484733 2308 ntTSL 510.36□□□□□ -0.756e-13■■□□□ 13
NCBP2P52298 SCFD1-215ENST00000555259 1553 ntTSL 1 (best)8.44□□□□□ -1.066e-13■■□□□ 13
NCBP2P52298 SCFD1-202ENST00000396629 2021 ntTSL 2 BASIC7.42□□□□□ -1.226e-13■■□□□ 13
NCBP2P52298 SCFD1-222ENST00000556768 1829 ntTSL 1 (best)6.71□□□□□ -1.346e-13■■□□□ 13
NCBP2P52298 SCFD1-223ENST00000557076 743 ntTSL 33.97□□□□□ -1.776e-13■■□□□ 13
NCBP2P52298 SCFD1-204ENST00000463622 1943 ntTSL 23.27□□□□□ -1.896e-13■■□□□ 13
NCBP2P52298 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC2.53□□□□□ -2.016e-13■■□□□ 13
NCBP2P52298 SCFD1-210ENST00000553693 490 ntTSL 32.06□□□□□ -2.086e-13■■□□□ 13
NCBP2P52298 TECR-210ENST00000597607 1164 ntTSL 314.79□□□□□ -0.045e-17■■□□□ 13
NCBP2P52298 TECR-208ENST00000596164 245 ntTSL 37.4□□□□□ -1.225e-17■■□□□ 13
NCBP2P52298 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC17.22■□□□□ 0.354e-18■■□□□ 13
NCBP2P52298 ACTN4-211ENST00000589528 441 ntTSL 213.62□□□□□ -0.234e-18■■□□□ 13
NCBP2P52298 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC13.05□□□□□ -0.324e-18■■□□□ 13
NCBP2P52298 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.162e-12■■□□□ 12.9
NCBP2P52298 GRB7-208ENST00000485182 879 ntTSL 215.97■□□□□ 0.152e-12■■□□□ 12.9
NCBP2P52298 GRB7-214ENST00000584853 570 ntTSL 415.37■□□□□ 0.052e-12■■□□□ 12.9
NCBP2P52298 GRB7-209ENST00000577695 612 ntTSL 513.7□□□□□ -0.222e-12■■□□□ 12.9
NCBP2P52298 GRB7-211ENST00000583813 560 ntTSL 413.33□□□□□ -0.282e-12■■□□□ 12.9
NCBP2P52298 SCFD1-213ENST00000554776 583 ntTSL 52.09□□□□□ -2.072e-12■■□□□ 12.9
NCBP2P52298 SCFD1-219ENST00000556413 512 ntTSL 31.96□□□□□ -2.12e-12■■□□□ 12.9
NCBP2P52298 GABPB1-AS1-204ENST00000560359 709 ntTSL 222.32■■□□□ 1.161e-14■■□□□ 12.9
NCBP2P52298 GABPB1-AS1-201ENST00000499326 717 ntTSL 27.38□□□□□ -1.231e-14■■□□□ 12.9
NCBP2P52298 GABPB1-AS1-205ENST00000561289 554 ntTSL 35.85□□□□□ -1.471e-14■■□□□ 12.9
NCBP2P52298 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.25□□□□□ -1.731e-14■■□□□ 12.9
NCBP2P52298 SLC37A4-204ENST00000525039 1780 ntTSL 1 (best)16■□□□□ 0.156e-10■■□□□ 12.9
NCBP2P52298 SLC37A4-213ENST00000532085 5862 ntTSL 1 (best)15.69■□□□□ 0.16e-10■■□□□ 12.9
NCBP2P52298 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.076e-10■■□□□ 12.9
NCBP2P52298 SLC37A4-212ENST00000530407 1472 ntTSL 215.15■□□□□ 0.026e-10■■□□□ 12.9
NCBP2P52298 SLC37A4-205ENST00000525102 2844 ntTSL 213.4□□□□□ -0.276e-10■■□□□ 12.9
NCBP2P52298 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.286e-10■■□□□ 12.9
NCBP2P52298 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC13.18□□□□□ -0.36e-10■■□□□ 12.9
NCBP2P52298 SLC37A4-219ENST00000638360 1912 ntTSL 513.13□□□□□ -0.316e-10■■□□□ 12.9
NCBP2P52298 SLC37A4-220ENST00000638925 2046 ntTSL 512.86□□□□□ -0.356e-10■■□□□ 12.9
NCBP2P52298 SLC37A4-202ENST00000357590 2356 ntTSL 5 BASIC12.77□□□□□ -0.376e-10■■□□□ 12.9
NCBP2P52298 SLC37A4-210ENST00000527992 2040 ntTSL 1 (best)11.89□□□□□ -0.516e-10■■□□□ 12.9
NCBP2P52298 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC13.93□□□□□ -0.181e-50■■□□□ 12.9
NCBP2P52298 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.231e-50■■□□□ 12.9
NCBP2P52298 MLXIPL-202ENST00000345114 3079 ntTSL 1 (best)12.92□□□□□ -0.341e-50■■□□□ 12.9
NCBP2P52298 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.452e-6■■□□□ 12.9
NCBP2P52298 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC23.87■■□□□ 1.412e-6■■□□□ 12.9
NCBP2P52298 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC23.47■■□□□ 1.352e-6■■□□□ 12.9
NCBP2P52298 SLC35D2-204ENST00000482643 754 ntTSL 520.14■□□□□ 0.812e-6■■□□□ 12.9
NCBP2P52298 F7-203ENST00000444337 564 ntTSL 518.27■□□□□ 0.528e-7■■□□□ 12.9
NCBP2P52298 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.118e-7■■□□□ 12.9
NCBP2P52298 F7-206ENST00000541084 2873 ntTSL 2 BASIC10.97□□□□□ -0.658e-7■■□□□ 12.9
NCBP2P52298 F7-202ENST00000375581 3109 ntAPPRIS P4 TSL 1 (best) BASIC10.35□□□□□ -0.758e-7■■□□□ 12.9
NCBP2P52298 METTL17-204ENST00000553441 635 ntTSL 210.03□□□□□ -0.81e-8■■□□□ 12.9
NCBP2P52298 METTL17-210ENST00000554751 556 ntTSL 59.58□□□□□ -0.881e-8■■□□□ 12.9
NCBP2P52298 METTL17-207ENST00000554283 568 ntTSL 48.08□□□□□ -1.121e-8■■□□□ 12.9
NCBP2P52298 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC16.64■□□□□ 0.251e-11■■□□□ 12.9
Retrieved 100 of 18,329 protein–RNA pairs in 204.3 ms