Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 AC083906.6-201ENST00000641366 219 ntBASIC21.35■■□□□ 1.01
USP11P51784 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC21.35■■□□□ 1.01
USP11P51784 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
USP11P51784 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
USP11P51784 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
USP11P51784 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
USP11P51784 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
USP11P51784 HEIH-201ENST00000623091 1652 ntBASIC21.34■■□□□ 1.01
USP11P51784 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
USP11P51784 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
USP11P51784 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC21.34■■□□□ 1.01
USP11P51784 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC21.34■■□□□ 1.01
USP11P51784 LGALS8-AS1-201ENST00000487567 1457 ntBASIC21.34■■□□□ 1.01
USP11P51784 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC21.34■■□□□ 1.01
USP11P51784 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
USP11P51784 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
USP11P51784 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
USP11P51784 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
USP11P51784 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC21.34■■□□□ 1.01
USP11P51784 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
USP11P51784 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
USP11P51784 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC21.34■■□□□ 1.01
USP11P51784 RCN1P1-201ENST00000400413 996 ntBASIC21.34■■□□□ 1.01
USP11P51784 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC21.34■■□□□ 1.01
USP11P51784 CR769767.2-201ENST00000622735 460 ntBASIC21.34■■□□□ 1.01
USP11P51784 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC21.34■■□□□ 1.01
USP11P51784 AC092865.7-201ENST00000641832 219 ntBASIC21.34■■□□□ 1.01
USP11P51784 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC21.34■■□□□ 1.01
USP11P51784 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
USP11P51784 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC21.34■■□□□ 1.01
USP11P51784 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC21.34■■□□□ 1.01
USP11P51784 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
USP11P51784 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
USP11P51784 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC21.33■■□□□ 1.01
USP11P51784 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC21.33■■□□□ 1.01
USP11P51784 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
USP11P51784 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
USP11P51784 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC21.33■■□□□ 1.01
USP11P51784 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC21.33■■□□□ 1.01
USP11P51784 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
USP11P51784 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC21.33■■□□□ 1.01
USP11P51784 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
USP11P51784 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
USP11P51784 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
USP11P51784 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
USP11P51784 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
USP11P51784 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
USP11P51784 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC21.33■■□□□ 1.01
USP11P51784 MIR3180-5-201ENST00000583743 153 ntBASIC21.33■■□□□ 1.01
USP11P51784 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
USP11P51784 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC21.33■■□□□ 1
USP11P51784 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC21.33■■□□□ 1
USP11P51784 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1
USP11P51784 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC21.33■■□□□ 1
USP11P51784 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC21.33■■□□□ 1
USP11P51784 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1
USP11P51784 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC21.33■■□□□ 1
USP11P51784 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1
USP11P51784 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1
USP11P51784 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
USP11P51784 AC008556.1-201ENST00000610908 2040 ntBASIC21.33■■□□□ 1
USP11P51784 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
USP11P51784 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC21.32■■□□□ 1
USP11P51784 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC21.32■■□□□ 1
USP11P51784 AC006333.2-201ENST00000607957 2099 ntBASIC21.32■■□□□ 1
USP11P51784 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC21.32■■□□□ 1
USP11P51784 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC21.32■■□□□ 1
USP11P51784 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC21.32■■□□□ 1
USP11P51784 ILF2-202ENST00000368681 726 ntTSL 2 BASIC21.32■■□□□ 1
USP11P51784 ATP5G1P1-201ENST00000448724 379 ntBASIC21.32■■□□□ 1
USP11P51784 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC21.32■■□□□ 1
USP11P51784 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC21.32■■□□□ 1
USP11P51784 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC21.32■■□□□ 1
USP11P51784 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC21.32■■□□□ 1
USP11P51784 AC141257.4-201ENST00000634557 245 ntBASIC21.32■■□□□ 1
USP11P51784 AC136944.6-201ENST00000634818 245 ntBASIC21.32■■□□□ 1
USP11P51784 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC21.32■■□□□ 1
USP11P51784 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC21.32■■□□□ 1
USP11P51784 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
USP11P51784 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
USP11P51784 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
USP11P51784 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC21.32■■□□□ 1
USP11P51784 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
USP11P51784 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC21.31■■□□□ 1
USP11P51784 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC21.31■■□□□ 1
USP11P51784 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC21.31■■□□□ 1
USP11P51784 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
USP11P51784 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
USP11P51784 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
USP11P51784 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC21.31■■□□□ 1
USP11P51784 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
USP11P51784 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC21.31■■□□□ 1
USP11P51784 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
USP11P51784 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC21.31■■□□□ 1
USP11P51784 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
USP11P51784 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
USP11P51784 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC21.31■■□□□ 1
USP11P51784 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
USP11P51784 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC21.31■■□□□ 1
USP11P51784 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC21.3■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms