Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC16.46■□□□□ 0.23
HCFC1P51610 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC16.46■□□□□ 0.23
HCFC1P51610 KRT8P26-201ENST00000534154 1276 ntBASIC16.46■□□□□ 0.23
HCFC1P51610 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HCFC1P51610 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC16.46■□□□□ 0.23
HCFC1P51610 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
HCFC1P51610 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HCFC1P51610 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
HCFC1P51610 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HCFC1P51610 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
HCFC1P51610 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
HCFC1P51610 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
HCFC1P51610 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HCFC1P51610 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HCFC1P51610 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC16.45■□□□□ 0.22
HCFC1P51610 DRAXINP1-201ENST00000437611 948 ntBASIC16.45■□□□□ 0.22
HCFC1P51610 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC16.45■□□□□ 0.22
HCFC1P51610 MIR3180-5-201ENST00000583743 153 ntBASIC16.45■□□□□ 0.22
HCFC1P51610 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC16.45■□□□□ 0.22
HCFC1P51610 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HCFC1P51610 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HCFC1P51610 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
HCFC1P51610 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
HCFC1P51610 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HCFC1P51610 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC16.45■□□□□ 0.22
HCFC1P51610 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
HCFC1P51610 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
HCFC1P51610 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HCFC1P51610 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HCFC1P51610 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC16.45■□□□□ 0.22
HCFC1P51610 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC16.45■□□□□ 0.22
HCFC1P51610 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC16.45■□□□□ 0.22
HCFC1P51610 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
HCFC1P51610 SLC25A6P4-201ENST00000586535 553 ntBASIC16.45■□□□□ 0.22
HCFC1P51610 AL671883.3-201ENST00000603274 991 ntBASIC16.45■□□□□ 0.22
HCFC1P51610 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HCFC1P51610 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HCFC1P51610 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC16.45■□□□□ 0.22
HCFC1P51610 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
HCFC1P51610 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HCFC1P51610 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
HCFC1P51610 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HCFC1P51610 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC16.44■□□□□ 0.22
HCFC1P51610 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC16.44■□□□□ 0.22
HCFC1P51610 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
HCFC1P51610 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
HCFC1P51610 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
HCFC1P51610 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC16.44■□□□□ 0.22
HCFC1P51610 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
HCFC1P51610 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
HCFC1P51610 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
HCFC1P51610 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HCFC1P51610 AC024243.1-201ENST00000609234 778 ntBASIC16.44■□□□□ 0.22
HCFC1P51610 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
HCFC1P51610 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC16.44■□□□□ 0.22
HCFC1P51610 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC16.44■□□□□ 0.22
HCFC1P51610 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HCFC1P51610 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HCFC1P51610 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC16.44■□□□□ 0.22
HCFC1P51610 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC16.44■□□□□ 0.22
HCFC1P51610 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC16.44■□□□□ 0.22
HCFC1P51610 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC16.44■□□□□ 0.22
HCFC1P51610 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC16.44■□□□□ 0.22
HCFC1P51610 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC16.43■□□□□ 0.22
HCFC1P51610 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC16.43■□□□□ 0.22
HCFC1P51610 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
HCFC1P51610 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
HCFC1P51610 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HCFC1P51610 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC16.43■□□□□ 0.22
HCFC1P51610 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
HCFC1P51610 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
HCFC1P51610 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
HCFC1P51610 RNF126P1-202ENST00000569893 925 ntBASIC16.43■□□□□ 0.22
HCFC1P51610 AC079602.3-201ENST00000623931 403 ntBASIC16.43■□□□□ 0.22
HCFC1P51610 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
HCFC1P51610 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HCFC1P51610 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HCFC1P51610 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
HCFC1P51610 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
HCFC1P51610 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC16.43■□□□□ 0.22
HCFC1P51610 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
HCFC1P51610 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
HCFC1P51610 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HCFC1P51610 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HCFC1P51610 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HCFC1P51610 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
HCFC1P51610 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
HCFC1P51610 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC16.43■□□□□ 0.22
HCFC1P51610 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
HCFC1P51610 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
HCFC1P51610 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC16.43■□□□□ 0.22
HCFC1P51610 AC074051.2-201ENST00000565115 352 ntBASIC16.43■□□□□ 0.22
HCFC1P51610 AP002414.4-201ENST00000589764 1148 ntBASIC16.43■□□□□ 0.22
HCFC1P51610 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
HCFC1P51610 AC004263.2-201ENST00000617183 678 ntBASIC16.43■□□□□ 0.22
HCFC1P51610 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HCFC1P51610 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC16.43■□□□□ 0.22
HCFC1P51610 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC16.42■□□□□ 0.22
HCFC1P51610 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HCFC1P51610 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms