Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC14.94□□□□□ -0.02
CDC34P49427 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC14.94□□□□□ -0.02
CDC34P49427 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC14.94□□□□□ -0.02
CDC34P49427 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC14.94□□□□□ -0.02
CDC34P49427 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CDC34P49427 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CDC34P49427 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDC34P49427 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDC34P49427 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDC34P49427 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CDC34P49427 AC008764.6-201ENST00000595909 2069 ntBASIC14.94□□□□□ -0.02
CDC34P49427 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC14.94□□□□□ -0.02
CDC34P49427 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC14.94□□□□□ -0.02
CDC34P49427 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDC34P49427 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC14.94□□□□□ -0.02
CDC34P49427 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDC34P49427 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDC34P49427 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDC34P49427 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CDC34P49427 COBL-210ENST00000632460 1941 ntTSL 5 BASIC14.94□□□□□ -0.02
CDC34P49427 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDC34P49427 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDC34P49427 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CDC34P49427 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
CDC34P49427 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC14.93□□□□□ -0.02
CDC34P49427 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CDC34P49427 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDC34P49427 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDC34P49427 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDC34P49427 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC14.93□□□□□ -0.02
CDC34P49427 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC14.93□□□□□ -0.02
CDC34P49427 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDC34P49427 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CDC34P49427 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC14.93□□□□□ -0.02
CDC34P49427 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDC34P49427 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CDC34P49427 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC14.93□□□□□ -0.02
CDC34P49427 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC14.93□□□□□ -0.02
CDC34P49427 AC142381.2-201ENST00000566120 298 ntBASIC14.93□□□□□ -0.02
CDC34P49427 GALNS-213ENST00000569433 723 ntTSL 3 BASIC14.93□□□□□ -0.02
CDC34P49427 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
CDC34P49427 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC14.93□□□□□ -0.02
CDC34P49427 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDC34P49427 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDC34P49427 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDC34P49427 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDC34P49427 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CDC34P49427 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDC34P49427 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
CDC34P49427 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDC34P49427 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDC34P49427 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC14.92□□□□□ -0.02
CDC34P49427 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDC34P49427 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CDC34P49427 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDC34P49427 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CDC34P49427 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC14.92□□□□□ -0.02
CDC34P49427 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC14.92□□□□□ -0.02
CDC34P49427 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
CDC34P49427 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDC34P49427 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC14.92□□□□□ -0.02
CDC34P49427 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDC34P49427 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDC34P49427 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC14.92□□□□□ -0.02
CDC34P49427 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDC34P49427 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CDC34P49427 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC14.92□□□□□ -0.02
CDC34P49427 C2orf69P4-201ENST00000565394 541 ntBASIC14.92□□□□□ -0.02
CDC34P49427 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CDC34P49427 CYP2T3P-201ENST00000601990 817 ntBASIC14.92□□□□□ -0.02
CDC34P49427 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CDC34P49427 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
CDC34P49427 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CDC34P49427 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
CDC34P49427 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CDC34P49427 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDC34P49427 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDC34P49427 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC14.92□□□□□ -0.02
CDC34P49427 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDC34P49427 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDC34P49427 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDC34P49427 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC14.92□□□□□ -0.02
CDC34P49427 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDC34P49427 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDC34P49427 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDC34P49427 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CDC34P49427 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDC34P49427 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDC34P49427 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDC34P49427 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC14.91□□□□□ -0.02
CDC34P49427 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDC34P49427 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDC34P49427 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC14.91□□□□□ -0.02
CDC34P49427 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CDC34P49427 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDC34P49427 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDC34P49427 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CDC34P49427 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
CDC34P49427 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
CDC34P49427 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms