Protein–RNA interactions for Protein: P35908

KRT2, Keratin, type II cytoskeletal 2 epidermal, humanhuman

Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT2P35908 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
KRT2P35908 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
KRT2P35908 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
KRT2P35908 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
KRT2P35908 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
KRT2P35908 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC21.67■■□□□ 1.06
KRT2P35908 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
KRT2P35908 AL512353.2-201ENST00000448759 1962 ntBASIC21.67■■□□□ 1.06
KRT2P35908 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
KRT2P35908 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
KRT2P35908 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
KRT2P35908 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
KRT2P35908 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
KRT2P35908 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
KRT2P35908 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
KRT2P35908 AC079598.2-202ENST00000546624 1451 ntBASIC21.67■■□□□ 1.06
KRT2P35908 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
KRT2P35908 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
KRT2P35908 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
KRT2P35908 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC21.67■■□□□ 1.06
KRT2P35908 AP005242.2-201ENST00000580065 1175 ntBASIC21.67■■□□□ 1.06
KRT2P35908 AP000525.1-201ENST00000608286 694 ntBASIC21.67■■□□□ 1.06
KRT2P35908 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
KRT2P35908 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
KRT2P35908 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
KRT2P35908 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC21.67■■□□□ 1.06
KRT2P35908 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
KRT2P35908 AL031598.1-201ENST00000561511 1773 ntBASIC21.66■■□□□ 1.06
KRT2P35908 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
KRT2P35908 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC21.66■■□□□ 1.06
KRT2P35908 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
KRT2P35908 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC21.66■■□□□ 1.06
KRT2P35908 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
KRT2P35908 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
KRT2P35908 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
KRT2P35908 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
KRT2P35908 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC21.66■■□□□ 1.06
KRT2P35908 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
KRT2P35908 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC21.66■■□□□ 1.06
KRT2P35908 SNX21-213ENST00000614929 587 ntTSL 5 BASIC21.66■■□□□ 1.06
KRT2P35908 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
KRT2P35908 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
KRT2P35908 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
KRT2P35908 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
KRT2P35908 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
KRT2P35908 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
KRT2P35908 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
KRT2P35908 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
KRT2P35908 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
KRT2P35908 HEIH-201ENST00000623091 1652 ntBASIC21.66■■□□□ 1.06
KRT2P35908 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
KRT2P35908 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
KRT2P35908 KRT8P32-201ENST00000512863 1461 ntBASIC21.65■■□□□ 1.06
KRT2P35908 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
KRT2P35908 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
KRT2P35908 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC21.65■■□□□ 1.06
KRT2P35908 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
KRT2P35908 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
KRT2P35908 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
KRT2P35908 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
KRT2P35908 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
KRT2P35908 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
KRT2P35908 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC21.65■■□□□ 1.06
KRT2P35908 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC21.65■■□□□ 1.06
KRT2P35908 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC21.65■■□□□ 1.06
KRT2P35908 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
KRT2P35908 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC21.65■■□□□ 1.06
KRT2P35908 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
KRT2P35908 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC21.65■■□□□ 1.06
KRT2P35908 AL020996.1-203ENST00000536896 2307 ntBASIC21.64■■□□□ 1.06
KRT2P35908 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
KRT2P35908 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.06
KRT2P35908 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
KRT2P35908 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.06
KRT2P35908 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.06
KRT2P35908 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
KRT2P35908 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.05
KRT2P35908 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC21.64■■□□□ 1.05
KRT2P35908 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
KRT2P35908 AC068587.9-201ENST00000641814 219 ntBASIC21.64■■□□□ 1.05
KRT2P35908 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC21.64■■□□□ 1.05
KRT2P35908 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC21.64■■□□□ 1.05
KRT2P35908 Z98044.1-201ENST00000632503 1764 ntBASIC21.64■■□□□ 1.05
KRT2P35908 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC21.63■■□□□ 1.05
KRT2P35908 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
KRT2P35908 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
KRT2P35908 TBC1D3P2-202ENST00000577902 1649 ntBASIC21.63■■□□□ 1.05
KRT2P35908 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC21.63■■□□□ 1.05
KRT2P35908 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
KRT2P35908 AL596275.1-201ENST00000423464 877 ntBASIC21.63■■□□□ 1.05
KRT2P35908 AL390955.1-201ENST00000428694 934 ntBASIC21.63■■□□□ 1.05
KRT2P35908 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
KRT2P35908 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
KRT2P35908 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC21.63■■□□□ 1.05
KRT2P35908 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
KRT2P35908 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC21.63■■□□□ 1.05
KRT2P35908 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
KRT2P35908 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
KRT2P35908 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC21.63■■□□□ 1.05
KRT2P35908 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC21.63■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms