Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CKS2P33552 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CKS2P33552 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC13.91□□□□□ -0.18
CKS2P33552 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC13.91□□□□□ -0.18
CKS2P33552 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CKS2P33552 TERF1P2-201ENST00000583350 1212 ntBASIC13.91□□□□□ -0.18
CKS2P33552 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC13.91□□□□□ -0.18
CKS2P33552 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
CKS2P33552 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC13.91□□□□□ -0.18
CKS2P33552 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
CKS2P33552 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
CKS2P33552 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
CKS2P33552 LINC02228-203ENST00000641970 1355 ntBASIC13.91□□□□□ -0.18
CKS2P33552 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CKS2P33552 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CKS2P33552 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC13.91□□□□□ -0.18
CKS2P33552 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
CKS2P33552 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CKS2P33552 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
CKS2P33552 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
CKS2P33552 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
CKS2P33552 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CKS2P33552 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CKS2P33552 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC13.91□□□□□ -0.18
CKS2P33552 AC139713.2-201ENST00000641328 2723 ntBASIC13.91□□□□□ -0.18
CKS2P33552 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CKS2P33552 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
CKS2P33552 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CKS2P33552 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC13.9□□□□□ -0.18
CKS2P33552 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CKS2P33552 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CKS2P33552 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC13.9□□□□□ -0.18
CKS2P33552 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CKS2P33552 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CKS2P33552 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC13.9□□□□□ -0.18
CKS2P33552 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CKS2P33552 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC13.9□□□□□ -0.18
CKS2P33552 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
CKS2P33552 PXK-206ENST00000463280 2825 ntTSL 2 BASIC13.9□□□□□ -0.18
CKS2P33552 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC13.9□□□□□ -0.18
CKS2P33552 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC13.9□□□□□ -0.18
CKS2P33552 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC13.9□□□□□ -0.18
CKS2P33552 AC096631.2-201ENST00000436136 790 ntBASIC13.9□□□□□ -0.18
CKS2P33552 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CKS2P33552 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CKS2P33552 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CKS2P33552 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CKS2P33552 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CKS2P33552 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CKS2P33552 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CKS2P33552 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC13.9□□□□□ -0.18
CKS2P33552 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
CKS2P33552 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC13.9□□□□□ -0.18
CKS2P33552 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC13.9□□□□□ -0.18
CKS2P33552 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CKS2P33552 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
CKS2P33552 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CKS2P33552 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CKS2P33552 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CKS2P33552 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CKS2P33552 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CKS2P33552 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC13.9□□□□□ -0.19
CKS2P33552 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC13.9□□□□□ -0.19
CKS2P33552 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC13.9□□□□□ -0.19
CKS2P33552 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CKS2P33552 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC13.89□□□□□ -0.19
CKS2P33552 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
CKS2P33552 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CKS2P33552 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CKS2P33552 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CKS2P33552 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC13.89□□□□□ -0.19
CKS2P33552 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
CKS2P33552 AL162741.1-201ENST00000565563 1558 ntBASIC13.89□□□□□ -0.19
CKS2P33552 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
CKS2P33552 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CKS2P33552 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CKS2P33552 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CKS2P33552 COX20-201ENST00000366528 568 ntTSL 2 BASIC13.89□□□□□ -0.19
CKS2P33552 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CKS2P33552 MCRIP2P1-201ENST00000394346 511 ntBASIC13.89□□□□□ -0.19
CKS2P33552 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CKS2P33552 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
CKS2P33552 AC023632.3-201ENST00000521633 145 ntBASIC13.89□□□□□ -0.19
CKS2P33552 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
CKS2P33552 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC13.89□□□□□ -0.19
CKS2P33552 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC13.89□□□□□ -0.19
CKS2P33552 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CKS2P33552 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CKS2P33552 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC13.89□□□□□ -0.19
CKS2P33552 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CKS2P33552 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
CKS2P33552 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC13.89□□□□□ -0.19
CKS2P33552 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CKS2P33552 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CKS2P33552 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC13.89□□□□□ -0.19
CKS2P33552 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
CKS2P33552 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CKS2P33552 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC13.89□□□□□ -0.19
CKS2P33552 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CKS2P33552 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms