Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SLC6A4P31645 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SLC6A4P31645 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SLC6A4P31645 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SLC6A4P31645 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SLC6A4P31645 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.4■□□□□ 0.7
SLC6A4P31645 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SLC6A4P31645 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC19.39■□□□□ 0.7
SLC6A4P31645 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SLC6A4P31645 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.39■□□□□ 0.7
SLC6A4P31645 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SLC6A4P31645 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC19.39■□□□□ 0.7
SLC6A4P31645 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SLC6A4P31645 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
SLC6A4P31645 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SLC6A4P31645 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
SLC6A4P31645 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SLC6A4P31645 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC19.39■□□□□ 0.69
SLC6A4P31645 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC19.39■□□□□ 0.69
SLC6A4P31645 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC19.39■□□□□ 0.69
SLC6A4P31645 NME3-204ENST00000563498 920 ntTSL 2 BASIC19.39■□□□□ 0.69
SLC6A4P31645 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
SLC6A4P31645 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SLC6A4P31645 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SLC6A4P31645 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SLC6A4P31645 KRT8P32-201ENST00000512863 1461 ntBASIC19.39■□□□□ 0.69
SLC6A4P31645 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SLC6A4P31645 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
SLC6A4P31645 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SLC6A4P31645 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
SLC6A4P31645 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SLC6A4P31645 AC008556.1-201ENST00000610908 2040 ntBASIC19.39■□□□□ 0.69
SLC6A4P31645 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SLC6A4P31645 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.39■□□□□ 0.69
SLC6A4P31645 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC19.38■□□□□ 0.69
SLC6A4P31645 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SLC6A4P31645 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SLC6A4P31645 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SLC6A4P31645 ANKRD20A18P-201ENST00000359341 492 ntBASIC19.38■□□□□ 0.69
SLC6A4P31645 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SLC6A4P31645 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SLC6A4P31645 RNF152P1-201ENST00000397754 604 ntBASIC19.38■□□□□ 0.69
SLC6A4P31645 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SLC6A4P31645 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SLC6A4P31645 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC19.38■□□□□ 0.69
SLC6A4P31645 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC19.38■□□□□ 0.69
SLC6A4P31645 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.38■□□□□ 0.69
SLC6A4P31645 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SLC6A4P31645 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC19.38■□□□□ 0.69
SLC6A4P31645 AC063952.2-201ENST00000498792 1227 ntBASIC19.38■□□□□ 0.69
SLC6A4P31645 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
SLC6A4P31645 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SLC6A4P31645 LTBR-211ENST00000543190 785 ntTSL 3 BASIC19.38■□□□□ 0.69
SLC6A4P31645 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC19.38■□□□□ 0.69
SLC6A4P31645 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
SLC6A4P31645 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC19.38■□□□□ 0.69
SLC6A4P31645 MIR3180-5-201ENST00000583743 153 ntBASIC19.38■□□□□ 0.69
SLC6A4P31645 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SLC6A4P31645 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SLC6A4P31645 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SLC6A4P31645 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
SLC6A4P31645 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
SLC6A4P31645 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SLC6A4P31645 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SLC6A4P31645 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SLC6A4P31645 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SLC6A4P31645 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC19.37■□□□□ 0.69
SLC6A4P31645 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC19.37■□□□□ 0.69
SLC6A4P31645 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC19.37■□□□□ 0.69
SLC6A4P31645 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.37■□□□□ 0.69
SLC6A4P31645 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SLC6A4P31645 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SLC6A4P31645 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SLC6A4P31645 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
SLC6A4P31645 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC19.37■□□□□ 0.69
SLC6A4P31645 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC19.37■□□□□ 0.69
SLC6A4P31645 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SLC6A4P31645 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SLC6A4P31645 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
SLC6A4P31645 GUK1-204ENST00000366721 689 ntTSL 3 BASIC19.37■□□□□ 0.69
SLC6A4P31645 TSPY5P-201ENST00000426936 936 ntBASIC19.37■□□□□ 0.69
SLC6A4P31645 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC19.37■□□□□ 0.69
SLC6A4P31645 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC19.37■□□□□ 0.69
SLC6A4P31645 AC022616.7-201ENST00000525383 220 ntBASIC19.37■□□□□ 0.69
SLC6A4P31645 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC19.37■□□□□ 0.69
SLC6A4P31645 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC19.37■□□□□ 0.69
SLC6A4P31645 NTF6B-201ENST00000591913 560 ntBASIC19.37■□□□□ 0.69
SLC6A4P31645 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
SLC6A4P31645 AL590326.2-201ENST00000625139 305 ntBASIC19.37■□□□□ 0.69
SLC6A4P31645 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SLC6A4P31645 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.37■□□□□ 0.69
SLC6A4P31645 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SLC6A4P31645 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SLC6A4P31645 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLC6A4P31645 AL109659.2-201ENST00000606809 1674 ntBASIC19.36■□□□□ 0.69
SLC6A4P31645 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLC6A4P31645 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLC6A4P31645 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SLC6A4P31645 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLC6A4P31645 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms