Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
CPS1P31327 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC26.69■■□□□ 1.86
CPS1P31327 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
CPS1P31327 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC26.69■■□□□ 1.86
CPS1P31327 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
CPS1P31327 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC26.69■■□□□ 1.86
CPS1P31327 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
CPS1P31327 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
CPS1P31327 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC26.68■■□□□ 1.86
CPS1P31327 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC26.68■■□□□ 1.86
CPS1P31327 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
CPS1P31327 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
CPS1P31327 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC26.68■■□□□ 1.86
CPS1P31327 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC26.68■■□□□ 1.86
CPS1P31327 AC145285.3-201ENST00000564603 959 ntBASIC26.68■■□□□ 1.86
CPS1P31327 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC26.68■■□□□ 1.86
CPS1P31327 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC26.68■■□□□ 1.86
CPS1P31327 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC26.68■■□□□ 1.86
CPS1P31327 AL049840.3-201ENST00000602669 611 ntBASIC26.68■■□□□ 1.86
CPS1P31327 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC26.68■■□□□ 1.86
CPS1P31327 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC26.68■■□□□ 1.86
CPS1P31327 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
CPS1P31327 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
CPS1P31327 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC26.68■■□□□ 1.86
CPS1P31327 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
CPS1P31327 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC26.67■■□□□ 1.86
CPS1P31327 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC26.67■■□□□ 1.86
CPS1P31327 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC26.67■■□□□ 1.86
CPS1P31327 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC26.67■■□□□ 1.86
CPS1P31327 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
CPS1P31327 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
CPS1P31327 GOLGA6L5P-202ENST00000515341 1828 ntBASIC26.67■■□□□ 1.86
CPS1P31327 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
CPS1P31327 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC26.67■■□□□ 1.86
CPS1P31327 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
CPS1P31327 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC26.67■■□□□ 1.86
CPS1P31327 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
CPS1P31327 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
CPS1P31327 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC26.67■■□□□ 1.86
CPS1P31327 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC26.67■■□□□ 1.86
CPS1P31327 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC26.66■■□□□ 1.86
CPS1P31327 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC26.66■■□□□ 1.86
CPS1P31327 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC26.66■■□□□ 1.86
CPS1P31327 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC26.66■■□□□ 1.86
CPS1P31327 MIR3180-5-201ENST00000583743 153 ntBASIC26.66■■□□□ 1.86
CPS1P31327 GAS2L1P1-201ENST00000420145 1480 ntBASIC26.66■■□□□ 1.86
CPS1P31327 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC26.66■■□□□ 1.86
CPS1P31327 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC26.66■■□□□ 1.86
CPS1P31327 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
CPS1P31327 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
CPS1P31327 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC26.65■■□□□ 1.86
CPS1P31327 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
CPS1P31327 AC004967.1-201ENST00000453589 447 ntBASIC26.65■■□□□ 1.86
CPS1P31327 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC26.65■■□□□ 1.86
CPS1P31327 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC26.65■■□□□ 1.86
CPS1P31327 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC26.65■■□□□ 1.86
CPS1P31327 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC26.65■■□□□ 1.86
CPS1P31327 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC26.65■■□□□ 1.86
CPS1P31327 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
CPS1P31327 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC26.65■■□□□ 1.86
CPS1P31327 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
CPS1P31327 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
CPS1P31327 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC26.65■■□□□ 1.86
CPS1P31327 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
CPS1P31327 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC26.65■■□□□ 1.86
CPS1P31327 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC26.65■■□□□ 1.86
CPS1P31327 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
CPS1P31327 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC26.65■■□□□ 1.86
CPS1P31327 VENTXP7-201ENST00000475503 772 ntBASIC26.65■■□□□ 1.86
CPS1P31327 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC26.65■■□□□ 1.86
CPS1P31327 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC26.65■■□□□ 1.86
CPS1P31327 AP005901.3-202ENST00000581653 237 ntBASIC26.65■■□□□ 1.86
CPS1P31327 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
CPS1P31327 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC26.65■■□□□ 1.86
CPS1P31327 PRKN-208ENST00000610470 531 ntTSL 2 BASIC26.65■■□□□ 1.86
CPS1P31327 PRKN-209ENST00000612485 225 ntTSL 5 BASIC26.65■■□□□ 1.86
CPS1P31327 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC26.65■■□□□ 1.86
CPS1P31327 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC26.64■■□□□ 1.86
CPS1P31327 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
CPS1P31327 PALM-208ENST00000592155 2272 ntTSL 4 BASIC26.64■■□□□ 1.86
CPS1P31327 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
CPS1P31327 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC26.64■■□□□ 1.86
CPS1P31327 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
CPS1P31327 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC26.64■■□□□ 1.86
CPS1P31327 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC26.64■■□□□ 1.86
CPS1P31327 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC26.64■■□□□ 1.85
CPS1P31327 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
CPS1P31327 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC26.64■■□□□ 1.85
CPS1P31327 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC26.64■■□□□ 1.85
CPS1P31327 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC26.64■■□□□ 1.85
CPS1P31327 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC26.64■■□□□ 1.85
CPS1P31327 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC26.64■■□□□ 1.85
CPS1P31327 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
CPS1P31327 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
CPS1P31327 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
CPS1P31327 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC26.63■■□□□ 1.85
CPS1P31327 SDHAP1-207ENST00000440850 2000 ntBASIC26.63■■□□□ 1.85
CPS1P31327 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC26.63■■□□□ 1.85
CPS1P31327 TCF3P1-201ENST00000423021 1937 ntBASIC26.63■■□□□ 1.85
CPS1P31327 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC26.63■■□□□ 1.85
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms