Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
VARSP26640 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.56■□□□□ 0.56
VARSP26640 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
VARSP26640 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC18.56■□□□□ 0.56
VARSP26640 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
VARSP26640 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
VARSP26640 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
VARSP26640 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
VARSP26640 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
VARSP26640 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
VARSP26640 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
VARSP26640 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC18.56■□□□□ 0.56
VARSP26640 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
VARSP26640 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
VARSP26640 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC18.55■□□□□ 0.56
VARSP26640 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
VARSP26640 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC18.55■□□□□ 0.56
VARSP26640 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
VARSP26640 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
VARSP26640 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
VARSP26640 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
VARSP26640 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
VARSP26640 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
VARSP26640 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC18.55■□□□□ 0.56
VARSP26640 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC18.55■□□□□ 0.56
VARSP26640 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
VARSP26640 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC18.55■□□□□ 0.56
VARSP26640 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC18.55■□□□□ 0.56
VARSP26640 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC18.55■□□□□ 0.56
VARSP26640 TK2-213ENST00000563369 882 ntTSL 5 BASIC18.55■□□□□ 0.56
VARSP26640 AL160286.2-201ENST00000567150 934 ntBASIC18.55■□□□□ 0.56
VARSP26640 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
VARSP26640 AC097493.4-201ENST00000641197 219 ntBASIC18.55■□□□□ 0.56
VARSP26640 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
VARSP26640 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
VARSP26640 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
VARSP26640 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
VARSP26640 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
VARSP26640 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
VARSP26640 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
VARSP26640 AL049812.1-201ENST00000432563 2267 ntBASIC18.54■□□□□ 0.56
VARSP26640 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.54■□□□□ 0.56
VARSP26640 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC18.54■□□□□ 0.56
VARSP26640 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
VARSP26640 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
VARSP26640 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
VARSP26640 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
VARSP26640 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
VARSP26640 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
VARSP26640 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
VARSP26640 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
VARSP26640 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
VARSP26640 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC18.54■□□□□ 0.56
VARSP26640 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
VARSP26640 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.54■□□□□ 0.56
VARSP26640 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
VARSP26640 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
VARSP26640 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
VARSP26640 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
VARSP26640 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC18.54■□□□□ 0.56
VARSP26640 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
VARSP26640 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
VARSP26640 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
VARSP26640 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
VARSP26640 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC18.54■□□□□ 0.56
VARSP26640 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
VARSP26640 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
VARSP26640 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC18.54■□□□□ 0.56
VARSP26640 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
VARSP26640 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
VARSP26640 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
VARSP26640 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18.53■□□□□ 0.56
VARSP26640 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
VARSP26640 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
VARSP26640 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
VARSP26640 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC18.53■□□□□ 0.56
VARSP26640 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC18.53■□□□□ 0.56
VARSP26640 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
VARSP26640 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.53■□□□□ 0.56
VARSP26640 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
VARSP26640 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
VARSP26640 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC18.53■□□□□ 0.56
VARSP26640 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC18.53■□□□□ 0.56
VARSP26640 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC18.53■□□□□ 0.56
VARSP26640 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC18.53■□□□□ 0.56
VARSP26640 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
VARSP26640 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
VARSP26640 SNX21-213ENST00000614929 587 ntTSL 5 BASIC18.53■□□□□ 0.56
VARSP26640 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
VARSP26640 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
VARSP26640 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC18.53■□□□□ 0.56
VARSP26640 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
VARSP26640 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
VARSP26640 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
VARSP26640 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
VARSP26640 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
VARSP26640 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC18.53■□□□□ 0.56
VARSP26640 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
VARSP26640 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC18.52■□□□□ 0.56
VARSP26640 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms