Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
NFKB1P19838 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC19.22■□□□□ 0.67
NFKB1P19838 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC19.22■□□□□ 0.67
NFKB1P19838 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NFKB1P19838 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
NFKB1P19838 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NFKB1P19838 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NFKB1P19838 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
NFKB1P19838 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC19.22■□□□□ 0.67
NFKB1P19838 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC19.22■□□□□ 0.67
NFKB1P19838 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC19.22■□□□□ 0.67
NFKB1P19838 DECR2-212ENST00000627716 352 ntTSL 2 BASIC19.22■□□□□ 0.67
NFKB1P19838 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC19.22■□□□□ 0.67
NFKB1P19838 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
NFKB1P19838 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC19.22■□□□□ 0.67
NFKB1P19838 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
NFKB1P19838 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC19.22■□□□□ 0.67
NFKB1P19838 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC19.22■□□□□ 0.67
NFKB1P19838 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NFKB1P19838 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
NFKB1P19838 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
NFKB1P19838 Z98044.1-201ENST00000632503 1764 ntBASIC19.21■□□□□ 0.67
NFKB1P19838 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC19.21■□□□□ 0.67
NFKB1P19838 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
NFKB1P19838 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
NFKB1P19838 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NFKB1P19838 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC19.21■□□□□ 0.67
NFKB1P19838 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
NFKB1P19838 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NFKB1P19838 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
NFKB1P19838 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
NFKB1P19838 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NFKB1P19838 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC19.21■□□□□ 0.67
NFKB1P19838 AL355355.2-201ENST00000442321 338 ntBASIC19.21■□□□□ 0.67
NFKB1P19838 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NFKB1P19838 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC19.21■□□□□ 0.67
NFKB1P19838 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NFKB1P19838 KRT8P3-201ENST00000519669 1449 ntBASIC19.21■□□□□ 0.67
NFKB1P19838 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC19.21■□□□□ 0.67
NFKB1P19838 SLC25A1P4-201ENST00000567977 778 ntBASIC19.21■□□□□ 0.67
NFKB1P19838 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC19.21■□□□□ 0.67
NFKB1P19838 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC19.21■□□□□ 0.67
NFKB1P19838 RNF165-205ENST00000588679 2904 ntBASIC19.21■□□□□ 0.67
NFKB1P19838 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC19.21■□□□□ 0.67
NFKB1P19838 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC19.21■□□□□ 0.67
NFKB1P19838 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC19.21■□□□□ 0.67
NFKB1P19838 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC19.21■□□□□ 0.67
NFKB1P19838 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC19.21■□□□□ 0.67
NFKB1P19838 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC19.2■□□□□ 0.66
NFKB1P19838 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NFKB1P19838 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC19.2■□□□□ 0.66
NFKB1P19838 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NFKB1P19838 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NFKB1P19838 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
NFKB1P19838 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NFKB1P19838 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NFKB1P19838 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
NFKB1P19838 MIR718-201ENST00000390190 70 ntBASIC19.2■□□□□ 0.66
NFKB1P19838 TSPY7P-201ENST00000431358 1114 ntBASIC19.2■□□□□ 0.66
NFKB1P19838 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC19.2■□□□□ 0.66
NFKB1P19838 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC19.2■□□□□ 0.66
NFKB1P19838 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
NFKB1P19838 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NFKB1P19838 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC19.2■□□□□ 0.66
NFKB1P19838 DGCR10-201ENST00000609839 495 ntBASIC19.2■□□□□ 0.66
NFKB1P19838 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC19.2■□□□□ 0.66
NFKB1P19838 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NFKB1P19838 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.2■□□□□ 0.66
NFKB1P19838 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NFKB1P19838 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.2■□□□□ 0.66
NFKB1P19838 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NFKB1P19838 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC19.2■□□□□ 0.66
NFKB1P19838 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
NFKB1P19838 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.66
NFKB1P19838 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
NFKB1P19838 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.19■□□□□ 0.66
NFKB1P19838 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC19.19■□□□□ 0.66
NFKB1P19838 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NFKB1P19838 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
NFKB1P19838 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC19.19■□□□□ 0.66
NFKB1P19838 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NFKB1P19838 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
NFKB1P19838 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NFKB1P19838 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
NFKB1P19838 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NFKB1P19838 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
NFKB1P19838 FDX2-206ENST00000492239 773 ntTSL 2 BASIC19.19■□□□□ 0.66
NFKB1P19838 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NFKB1P19838 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC19.19■□□□□ 0.66
NFKB1P19838 AP003071.4-201ENST00000562276 1284 ntBASIC19.19■□□□□ 0.66
NFKB1P19838 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC19.19■□□□□ 0.66
NFKB1P19838 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NFKB1P19838 ANO7L1-203ENST00000602586 1720 ntBASIC19.19■□□□□ 0.66
NFKB1P19838 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.19■□□□□ 0.66
NFKB1P19838 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
NFKB1P19838 USP49-202ENST00000373010 2446 ntTSL 5 BASIC19.19■□□□□ 0.66
NFKB1P19838 AC096733.2-201ENST00000609937 1394 ntBASIC19.19■□□□□ 0.66
NFKB1P19838 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC19.18■□□□□ 0.66
NFKB1P19838 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
NFKB1P19838 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms