Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
PDGFRAP16234 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
PDGFRAP16234 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
PDGFRAP16234 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC19.83■□□□□ 0.77
PDGFRAP16234 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.83■□□□□ 0.77
PDGFRAP16234 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PDGFRAP16234 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
PDGFRAP16234 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
PDGFRAP16234 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
PDGFRAP16234 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC19.83■□□□□ 0.77
PDGFRAP16234 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC19.83■□□□□ 0.77
PDGFRAP16234 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC19.83■□□□□ 0.77
PDGFRAP16234 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.76
PDGFRAP16234 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.83■□□□□ 0.76
PDGFRAP16234 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC19.83■□□□□ 0.76
PDGFRAP16234 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
PDGFRAP16234 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
PDGFRAP16234 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
PDGFRAP16234 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
PDGFRAP16234 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
PDGFRAP16234 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
PDGFRAP16234 AC096733.2-201ENST00000609937 1394 ntBASIC19.83■□□□□ 0.76
PDGFRAP16234 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PDGFRAP16234 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PDGFRAP16234 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC19.82■□□□□ 0.76
PDGFRAP16234 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PDGFRAP16234 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC19.82■□□□□ 0.76
PDGFRAP16234 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
PDGFRAP16234 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC19.82■□□□□ 0.76
PDGFRAP16234 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC19.82■□□□□ 0.76
PDGFRAP16234 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
PDGFRAP16234 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC19.82■□□□□ 0.76
PDGFRAP16234 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PDGFRAP16234 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC19.82■□□□□ 0.76
PDGFRAP16234 RPS20-210ENST00000523936 899 ntTSL 2 BASIC19.82■□□□□ 0.76
PDGFRAP16234 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC19.82■□□□□ 0.76
PDGFRAP16234 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PDGFRAP16234 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
PDGFRAP16234 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
PDGFRAP16234 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PDGFRAP16234 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
PDGFRAP16234 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
PDGFRAP16234 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PDGFRAP16234 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PDGFRAP16234 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC19.81■□□□□ 0.76
PDGFRAP16234 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
PDGFRAP16234 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
PDGFRAP16234 KATNBL1P6-202ENST00000562413 1466 ntBASIC19.81■□□□□ 0.76
PDGFRAP16234 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC19.81■□□□□ 0.76
PDGFRAP16234 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
PDGFRAP16234 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
PDGFRAP16234 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PDGFRAP16234 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PDGFRAP16234 MIR1238-201ENST00000408483 83 ntBASIC19.81■□□□□ 0.76
PDGFRAP16234 AC087499.1-201ENST00000418141 1075 ntBASIC19.81■□□□□ 0.76
PDGFRAP16234 MFAP1P1-201ENST00000442257 1255 ntBASIC19.81■□□□□ 0.76
PDGFRAP16234 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC19.81■□□□□ 0.76
PDGFRAP16234 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC19.81■□□□□ 0.76
PDGFRAP16234 FDX2-206ENST00000492239 773 ntTSL 2 BASIC19.81■□□□□ 0.76
PDGFRAP16234 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC19.81■□□□□ 0.76
PDGFRAP16234 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC19.81■□□□□ 0.76
PDGFRAP16234 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC19.81■□□□□ 0.76
PDGFRAP16234 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PDGFRAP16234 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
PDGFRAP16234 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.81■□□□□ 0.76
PDGFRAP16234 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PDGFRAP16234 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PDGFRAP16234 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.81■□□□□ 0.76
PDGFRAP16234 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.81■□□□□ 0.76
PDGFRAP16234 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PDGFRAP16234 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
PDGFRAP16234 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
PDGFRAP16234 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC19.81■□□□□ 0.76
PDGFRAP16234 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PDGFRAP16234 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
PDGFRAP16234 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.81■□□□□ 0.76
PDGFRAP16234 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PDGFRAP16234 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PDGFRAP16234 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC19.8■□□□□ 0.76
PDGFRAP16234 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PDGFRAP16234 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PDGFRAP16234 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PDGFRAP16234 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
PDGFRAP16234 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
PDGFRAP16234 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC19.8■□□□□ 0.76
PDGFRAP16234 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PDGFRAP16234 KRT8P3-201ENST00000519669 1449 ntBASIC19.8■□□□□ 0.76
PDGFRAP16234 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC19.8■□□□□ 0.76
PDGFRAP16234 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
PDGFRAP16234 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
PDGFRAP16234 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC19.8■□□□□ 0.76
PDGFRAP16234 AC211429.1-201ENST00000415277 523 ntBASIC19.8■□□□□ 0.76
PDGFRAP16234 CRYGFP-201ENST00000418459 633 ntBASIC19.8■□□□□ 0.76
PDGFRAP16234 AL390955.1-201ENST00000428694 934 ntBASIC19.8■□□□□ 0.76
PDGFRAP16234 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC19.8■□□□□ 0.76
PDGFRAP16234 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC19.8■□□□□ 0.76
PDGFRAP16234 GRAMD4P8-201ENST00000605465 1115 ntBASIC19.8■□□□□ 0.76
PDGFRAP16234 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC19.8■□□□□ 0.76
PDGFRAP16234 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PDGFRAP16234 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms