Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
CDH1P12830 IRX1P1-201ENST00000438849 1838 ntBASIC18.42■□□□□ 0.54
CDH1P12830 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC18.42■□□□□ 0.54
CDH1P12830 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
CDH1P12830 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.42■□□□□ 0.54
CDH1P12830 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CDH1P12830 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
CDH1P12830 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CDH1P12830 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
CDH1P12830 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.42■□□□□ 0.54
CDH1P12830 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CDH1P12830 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC18.42■□□□□ 0.54
CDH1P12830 MESTP1-201ENST00000404287 994 ntBASIC18.42■□□□□ 0.54
CDH1P12830 TSPY7P-201ENST00000431358 1114 ntBASIC18.42■□□□□ 0.54
CDH1P12830 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC18.42■□□□□ 0.54
CDH1P12830 AC008040.2-201ENST00000461049 708 ntBASIC18.42■□□□□ 0.54
CDH1P12830 NUDT16P1-203ENST00000513809 620 ntBASIC18.42■□□□□ 0.54
CDH1P12830 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC18.42■□□□□ 0.54
CDH1P12830 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC18.42■□□□□ 0.54
CDH1P12830 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC18.42■□□□□ 0.54
CDH1P12830 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
CDH1P12830 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CDH1P12830 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC18.42■□□□□ 0.54
CDH1P12830 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.42■□□□□ 0.54
CDH1P12830 AL049812.1-201ENST00000432563 2267 ntBASIC18.42■□□□□ 0.54
CDH1P12830 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CDH1P12830 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
CDH1P12830 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CDH1P12830 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
CDH1P12830 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDH1P12830 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDH1P12830 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC18.41■□□□□ 0.54
CDH1P12830 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.41■□□□□ 0.54
CDH1P12830 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDH1P12830 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC18.41■□□□□ 0.54
CDH1P12830 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC18.41■□□□□ 0.54
CDH1P12830 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDH1P12830 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDH1P12830 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
CDH1P12830 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CDH1P12830 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDH1P12830 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
CDH1P12830 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC18.41■□□□□ 0.54
CDH1P12830 AL355355.2-201ENST00000442321 338 ntBASIC18.41■□□□□ 0.54
CDH1P12830 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC18.41■□□□□ 0.54
CDH1P12830 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC18.41■□□□□ 0.54
CDH1P12830 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC18.41■□□□□ 0.54
CDH1P12830 AC026471.5-201ENST00000615068 467 ntBASIC18.41■□□□□ 0.54
CDH1P12830 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.41■□□□□ 0.54
CDH1P12830 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDH1P12830 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDH1P12830 GOLGA6L5P-202ENST00000515341 1828 ntBASIC18.41■□□□□ 0.54
CDH1P12830 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CDH1P12830 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CDH1P12830 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC18.41■□□□□ 0.54
CDH1P12830 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC18.41■□□□□ 0.54
CDH1P12830 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
CDH1P12830 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.41■□□□□ 0.54
CDH1P12830 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDH1P12830 KRT8P11-201ENST00000409686 1436 ntBASIC18.4■□□□□ 0.54
CDH1P12830 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CDH1P12830 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
CDH1P12830 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC18.4■□□□□ 0.54
CDH1P12830 FSCN1P1-201ENST00000568912 1481 ntBASIC18.4■□□□□ 0.54
CDH1P12830 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CDH1P12830 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDH1P12830 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CDH1P12830 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDH1P12830 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC18.4■□□□□ 0.54
CDH1P12830 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDH1P12830 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDH1P12830 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDH1P12830 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC18.4■□□□□ 0.54
CDH1P12830 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
CDH1P12830 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDH1P12830 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CDH1P12830 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
CDH1P12830 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC18.4■□□□□ 0.54
CDH1P12830 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDH1P12830 SNORA78-201ENST00000459373 127 ntBASIC18.4■□□□□ 0.54
CDH1P12830 AC093827.2-201ENST00000512654 315 ntBASIC18.4■□□□□ 0.54
CDH1P12830 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC18.4■□□□□ 0.54
CDH1P12830 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC18.4■□□□□ 0.54
CDH1P12830 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC18.4■□□□□ 0.54
CDH1P12830 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC18.4■□□□□ 0.54
CDH1P12830 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC18.4■□□□□ 0.54
CDH1P12830 AC130371.2-201ENST00000619443 611 ntBASIC18.4■□□□□ 0.54
CDH1P12830 DECR2-212ENST00000627716 352 ntTSL 2 BASIC18.4■□□□□ 0.54
CDH1P12830 AC066615.1-201ENST00000640911 628 ntBASIC18.4■□□□□ 0.54
CDH1P12830 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDH1P12830 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDH1P12830 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC18.4■□□□□ 0.54
CDH1P12830 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CDH1P12830 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC18.4■□□□□ 0.54
CDH1P12830 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
CDH1P12830 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
CDH1P12830 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDH1P12830 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
CDH1P12830 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CDH1P12830 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms