Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
UBL4AP11441 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC17.47■□□□□ 0.39
UBL4AP11441 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
UBL4AP11441 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.47■□□□□ 0.39
UBL4AP11441 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.47■□□□□ 0.39
UBL4AP11441 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC17.47■□□□□ 0.39
UBL4AP11441 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
UBL4AP11441 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
UBL4AP11441 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC17.47■□□□□ 0.39
UBL4AP11441 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
UBL4AP11441 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
UBL4AP11441 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
UBL4AP11441 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
UBL4AP11441 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
UBL4AP11441 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
UBL4AP11441 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC17.47■□□□□ 0.39
UBL4AP11441 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC17.47■□□□□ 0.39
UBL4AP11441 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
UBL4AP11441 USP36-216ENST00000589424 970 ntTSL 5 BASIC17.47■□□□□ 0.39
UBL4AP11441 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC17.47■□□□□ 0.39
UBL4AP11441 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
UBL4AP11441 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
UBL4AP11441 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC17.47■□□□□ 0.39
UBL4AP11441 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
UBL4AP11441 AC138932.1-201ENST00000534164 6830 ntBASIC17.47■□□□□ 0.39
UBL4AP11441 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17.47■□□□□ 0.39
UBL4AP11441 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
UBL4AP11441 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
UBL4AP11441 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
UBL4AP11441 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
UBL4AP11441 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
UBL4AP11441 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
UBL4AP11441 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
UBL4AP11441 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
UBL4AP11441 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.46■□□□□ 0.39
UBL4AP11441 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC17.46■□□□□ 0.39
UBL4AP11441 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
UBL4AP11441 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
UBL4AP11441 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
UBL4AP11441 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
UBL4AP11441 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
UBL4AP11441 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC17.46■□□□□ 0.39
UBL4AP11441 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC17.46■□□□□ 0.39
UBL4AP11441 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
UBL4AP11441 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
UBL4AP11441 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
UBL4AP11441 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
UBL4AP11441 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC17.46■□□□□ 0.39
UBL4AP11441 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC17.46■□□□□ 0.39
UBL4AP11441 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC17.46■□□□□ 0.39
UBL4AP11441 AC233702.5-201ENST00000584107 538 ntBASIC17.46■□□□□ 0.39
UBL4AP11441 AC011298.2-201ENST00000617989 482 ntBASIC17.46■□□□□ 0.39
UBL4AP11441 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
UBL4AP11441 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
UBL4AP11441 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
UBL4AP11441 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
UBL4AP11441 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
UBL4AP11441 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
UBL4AP11441 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
UBL4AP11441 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
UBL4AP11441 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC17.46■□□□□ 0.39
UBL4AP11441 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
UBL4AP11441 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
UBL4AP11441 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC17.46■□□□□ 0.39
UBL4AP11441 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC17.46■□□□□ 0.38
UBL4AP11441 SRI-203ENST00000419179 1307 ntTSL 2 BASIC17.46■□□□□ 0.38
UBL4AP11441 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC17.46■□□□□ 0.38
UBL4AP11441 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
UBL4AP11441 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC17.45■□□□□ 0.38
UBL4AP11441 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
UBL4AP11441 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
UBL4AP11441 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
UBL4AP11441 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
UBL4AP11441 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
UBL4AP11441 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
UBL4AP11441 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.45■□□□□ 0.38
UBL4AP11441 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
UBL4AP11441 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
UBL4AP11441 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC17.45■□□□□ 0.38
UBL4AP11441 AC091390.4-202ENST00000476426 537 ntBASIC17.45■□□□□ 0.38
UBL4AP11441 PRSS44-201ENST00000515154 1146 ntBASIC17.45■□□□□ 0.38
UBL4AP11441 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC17.45■□□□□ 0.38
UBL4AP11441 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC17.45■□□□□ 0.38
UBL4AP11441 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
UBL4AP11441 MIR6786-201ENST00000616843 113 ntBASIC17.45■□□□□ 0.38
UBL4AP11441 AL049637.2-201ENST00000641778 930 ntBASIC17.45■□□□□ 0.38
UBL4AP11441 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
UBL4AP11441 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
UBL4AP11441 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
UBL4AP11441 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
UBL4AP11441 KRT8P11-201ENST00000409686 1436 ntBASIC17.45■□□□□ 0.38
UBL4AP11441 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
UBL4AP11441 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
UBL4AP11441 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
UBL4AP11441 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
UBL4AP11441 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC17.44■□□□□ 0.38
UBL4AP11441 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
UBL4AP11441 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
UBL4AP11441 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
UBL4AP11441 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms