Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 STX6-204ENST00000542060 4809 ntTSL 2 BASIC25.02■■□□□ 1.6
CSB-PGBD3P0DP91 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
CSB-PGBD3P0DP91 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
CSB-PGBD3P0DP91 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
CSB-PGBD3P0DP91 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
CSB-PGBD3P0DP91 MED17-221ENST00000639724 2317 ntTSL 5 BASIC25.02■■□□□ 1.6
CSB-PGBD3P0DP91 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC25.02■■□□□ 1.6
CSB-PGBD3P0DP91 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
CSB-PGBD3P0DP91 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC25.01■■□□□ 1.59
CSB-PGBD3P0DP91 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC25.01■■□□□ 1.59
CSB-PGBD3P0DP91 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
CSB-PGBD3P0DP91 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
CSB-PGBD3P0DP91 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC25.01■■□□□ 1.59
CSB-PGBD3P0DP91 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
CSB-PGBD3P0DP91 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC25.01■■□□□ 1.59
CSB-PGBD3P0DP91 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC25.01■■□□□ 1.59
CSB-PGBD3P0DP91 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
CSB-PGBD3P0DP91 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC25.01■■□□□ 1.59
CSB-PGBD3P0DP91 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC25.01■■□□□ 1.59
CSB-PGBD3P0DP91 AC104819.1-201ENST00000504587 486 ntBASIC25.01■■□□□ 1.59
CSB-PGBD3P0DP91 AC079776.4-201ENST00000511039 504 ntBASIC25.01■■□□□ 1.59
CSB-PGBD3P0DP91 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC25.01■■□□□ 1.59
CSB-PGBD3P0DP91 AC138894.3-201ENST00000603787 634 ntBASIC25.01■■□□□ 1.59
CSB-PGBD3P0DP91 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC25.01■■□□□ 1.59
CSB-PGBD3P0DP91 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
CSB-PGBD3P0DP91 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
CSB-PGBD3P0DP91 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
CSB-PGBD3P0DP91 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC25■■□□□ 1.59
CSB-PGBD3P0DP91 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
CSB-PGBD3P0DP91 TCF3P1-201ENST00000423021 1937 ntBASIC25■■□□□ 1.59
CSB-PGBD3P0DP91 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
CSB-PGBD3P0DP91 BAALC-202ENST00000306391 243 ntTSL 5 BASIC25■■□□□ 1.59
CSB-PGBD3P0DP91 BAALC-204ENST00000330955 222 ntTSL 5 BASIC25■■□□□ 1.59
CSB-PGBD3P0DP91 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC25■■□□□ 1.59
CSB-PGBD3P0DP91 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC25■■□□□ 1.59
CSB-PGBD3P0DP91 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC25■■□□□ 1.59
CSB-PGBD3P0DP91 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC25■■□□□ 1.59
CSB-PGBD3P0DP91 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
CSB-PGBD3P0DP91 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC25■■□□□ 1.59
CSB-PGBD3P0DP91 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC25■■□□□ 1.59
CSB-PGBD3P0DP91 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC25■■□□□ 1.59
CSB-PGBD3P0DP91 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
CSB-PGBD3P0DP91 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
CSB-PGBD3P0DP91 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
CSB-PGBD3P0DP91 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
CSB-PGBD3P0DP91 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC25■■□□□ 1.59
CSB-PGBD3P0DP91 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
CSB-PGBD3P0DP91 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC24.99■■□□□ 1.59
CSB-PGBD3P0DP91 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
CSB-PGBD3P0DP91 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC24.99■■□□□ 1.59
CSB-PGBD3P0DP91 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
CSB-PGBD3P0DP91 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
CSB-PGBD3P0DP91 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
CSB-PGBD3P0DP91 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC24.99■■□□□ 1.59
CSB-PGBD3P0DP91 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
CSB-PGBD3P0DP91 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
CSB-PGBD3P0DP91 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC24.99■■□□□ 1.59
CSB-PGBD3P0DP91 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC24.99■■□□□ 1.59
CSB-PGBD3P0DP91 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC24.99■■□□□ 1.59
CSB-PGBD3P0DP91 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC24.99■■□□□ 1.59
CSB-PGBD3P0DP91 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC24.99■■□□□ 1.59
CSB-PGBD3P0DP91 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC24.99■■□□□ 1.59
CSB-PGBD3P0DP91 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
CSB-PGBD3P0DP91 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC24.99■■□□□ 1.59
CSB-PGBD3P0DP91 AC005332.3-201ENST00000589904 676 ntBASIC24.99■■□□□ 1.59
CSB-PGBD3P0DP91 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC24.99■■□□□ 1.59
CSB-PGBD3P0DP91 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC24.99■■□□□ 1.59
CSB-PGBD3P0DP91 AC010240.3-201ENST00000607688 395 ntBASIC24.99■■□□□ 1.59
CSB-PGBD3P0DP91 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC24.99■■□□□ 1.59
CSB-PGBD3P0DP91 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
CSB-PGBD3P0DP91 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC24.98■■□□□ 1.59
CSB-PGBD3P0DP91 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC24.98■■□□□ 1.59
CSB-PGBD3P0DP91 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC24.98■■□□□ 1.59
CSB-PGBD3P0DP91 RCC2P3-201ENST00000418112 1537 ntBASIC24.98■■□□□ 1.59
CSB-PGBD3P0DP91 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
CSB-PGBD3P0DP91 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC24.98■■□□□ 1.59
CSB-PGBD3P0DP91 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC24.98■■□□□ 1.59
CSB-PGBD3P0DP91 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
CSB-PGBD3P0DP91 AC074051.2-201ENST00000565115 352 ntBASIC24.98■■□□□ 1.59
CSB-PGBD3P0DP91 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
CSB-PGBD3P0DP91 GPALPP1-207ENST00000611650 899 ntBASIC24.98■■□□□ 1.59
CSB-PGBD3P0DP91 IGHV3-41-201ENST00000613121 348 ntBASIC24.98■■□□□ 1.59
CSB-PGBD3P0DP91 AC023511.2-201ENST00000618803 211 ntBASIC24.98■■□□□ 1.59
CSB-PGBD3P0DP91 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC24.98■■□□□ 1.59
CSB-PGBD3P0DP91 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC24.98■■□□□ 1.59
CSB-PGBD3P0DP91 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
CSB-PGBD3P0DP91 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
CSB-PGBD3P0DP91 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC24.97■■□□□ 1.59
CSB-PGBD3P0DP91 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC24.97■■□□□ 1.59
CSB-PGBD3P0DP91 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC24.97■■□□□ 1.59
CSB-PGBD3P0DP91 AC008556.1-201ENST00000610908 2040 ntBASIC24.97■■□□□ 1.59
CSB-PGBD3P0DP91 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC24.97■■□□□ 1.59
CSB-PGBD3P0DP91 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
CSB-PGBD3P0DP91 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC24.97■■□□□ 1.59
CSB-PGBD3P0DP91 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
CSB-PGBD3P0DP91 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC24.97■■□□□ 1.59
CSB-PGBD3P0DP91 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC24.97■■□□□ 1.59
CSB-PGBD3P0DP91 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
CSB-PGBD3P0DP91 AP003733.1-201ENST00000491725 852 ntBASIC24.97■■□□□ 1.59
CSB-PGBD3P0DP91 CALM1-205ENST00000553542 877 ntTSL 5 BASIC24.97■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms