Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
RAB40ALP0C0E4 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RAB40ALP0C0E4 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
RAB40ALP0C0E4 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RAB40ALP0C0E4 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RAB40ALP0C0E4 PCED1CP-201ENST00000419887 785 ntBASIC17.81■□□□□ 0.44
RAB40ALP0C0E4 SNX5-210ENST00000481323 562 ntTSL 3 BASIC17.81■□□□□ 0.44
RAB40ALP0C0E4 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC17.81■□□□□ 0.44
RAB40ALP0C0E4 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
RAB40ALP0C0E4 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RAB40ALP0C0E4 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RAB40ALP0C0E4 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RAB40ALP0C0E4 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
RAB40ALP0C0E4 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
RAB40ALP0C0E4 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RAB40ALP0C0E4 LBX2-AS1-202ENST00000603175 2083 ntBASIC17.81■□□□□ 0.44
RAB40ALP0C0E4 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
RAB40ALP0C0E4 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC17.81■□□□□ 0.44
RAB40ALP0C0E4 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RAB40ALP0C0E4 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC17.8■□□□□ 0.44
RAB40ALP0C0E4 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
RAB40ALP0C0E4 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC17.8■□□□□ 0.44
RAB40ALP0C0E4 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RAB40ALP0C0E4 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RAB40ALP0C0E4 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC17.8■□□□□ 0.44
RAB40ALP0C0E4 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC17.8■□□□□ 0.44
RAB40ALP0C0E4 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
RAB40ALP0C0E4 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RAB40ALP0C0E4 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RAB40ALP0C0E4 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC17.8■□□□□ 0.44
RAB40ALP0C0E4 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RAB40ALP0C0E4 GAD2-202ENST00000376248 680 ntTSL 5 BASIC17.8■□□□□ 0.44
RAB40ALP0C0E4 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
RAB40ALP0C0E4 KRT18P38-201ENST00000449496 1282 ntBASIC17.8■□□□□ 0.44
RAB40ALP0C0E4 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC17.8■□□□□ 0.44
RAB40ALP0C0E4 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC17.8■□□□□ 0.44
RAB40ALP0C0E4 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RAB40ALP0C0E4 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
RAB40ALP0C0E4 CR769767.2-201ENST00000622735 460 ntBASIC17.8■□□□□ 0.44
RAB40ALP0C0E4 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC17.8■□□□□ 0.44
RAB40ALP0C0E4 SDHAP1-207ENST00000440850 2000 ntBASIC17.8■□□□□ 0.44
RAB40ALP0C0E4 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC17.8■□□□□ 0.44
RAB40ALP0C0E4 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RAB40ALP0C0E4 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RAB40ALP0C0E4 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
RAB40ALP0C0E4 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RAB40ALP0C0E4 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RAB40ALP0C0E4 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
RAB40ALP0C0E4 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.79■□□□□ 0.44
RAB40ALP0C0E4 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC17.79■□□□□ 0.44
RAB40ALP0C0E4 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RAB40ALP0C0E4 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC17.79■□□□□ 0.44
RAB40ALP0C0E4 ILF2-202ENST00000368681 726 ntTSL 2 BASIC17.79■□□□□ 0.44
RAB40ALP0C0E4 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC17.79■□□□□ 0.44
RAB40ALP0C0E4 COPS8-203ENST00000409334 794 ntTSL 5 BASIC17.79■□□□□ 0.44
RAB40ALP0C0E4 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC17.79■□□□□ 0.44
RAB40ALP0C0E4 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
RAB40ALP0C0E4 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RAB40ALP0C0E4 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC17.79■□□□□ 0.44
RAB40ALP0C0E4 GCSHP2-201ENST00000560971 527 ntBASIC17.79■□□□□ 0.44
RAB40ALP0C0E4 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC17.79■□□□□ 0.44
RAB40ALP0C0E4 AL020996.1-203ENST00000536896 2307 ntBASIC17.79■□□□□ 0.44
RAB40ALP0C0E4 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
RAB40ALP0C0E4 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RAB40ALP0C0E4 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RAB40ALP0C0E4 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC17.79■□□□□ 0.44
RAB40ALP0C0E4 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
RAB40ALP0C0E4 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RAB40ALP0C0E4 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
RAB40ALP0C0E4 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RAB40ALP0C0E4 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC17.79■□□□□ 0.44
RAB40ALP0C0E4 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC17.79■□□□□ 0.44
RAB40ALP0C0E4 IER3-202ENST00000376377 1350 ntBASIC17.79■□□□□ 0.44
RAB40ALP0C0E4 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC17.78■□□□□ 0.44
RAB40ALP0C0E4 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
RAB40ALP0C0E4 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
RAB40ALP0C0E4 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
RAB40ALP0C0E4 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RAB40ALP0C0E4 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC17.78■□□□□ 0.44
RAB40ALP0C0E4 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
RAB40ALP0C0E4 LY6E-213ENST00000522528 606 ntTSL 3 BASIC17.78■□□□□ 0.44
RAB40ALP0C0E4 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC17.78■□□□□ 0.44
RAB40ALP0C0E4 AL136038.3-201ENST00000561909 1096 ntBASIC17.78■□□□□ 0.44
RAB40ALP0C0E4 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC17.78■□□□□ 0.44
RAB40ALP0C0E4 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RAB40ALP0C0E4 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
RAB40ALP0C0E4 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RAB40ALP0C0E4 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RAB40ALP0C0E4 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RAB40ALP0C0E4 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC17.78■□□□□ 0.44
RAB40ALP0C0E4 GAS2L1P1-201ENST00000420145 1480 ntBASIC17.77■□□□□ 0.44
RAB40ALP0C0E4 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RAB40ALP0C0E4 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RAB40ALP0C0E4 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
RAB40ALP0C0E4 AC112907.2-201ENST00000448639 330 ntBASIC17.77■□□□□ 0.44
RAB40ALP0C0E4 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
RAB40ALP0C0E4 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC17.77■□□□□ 0.44
RAB40ALP0C0E4 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RAB40ALP0C0E4 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
RAB40ALP0C0E4 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms