Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CD48P09326 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.59■□□□□ 0.73
CD48P09326 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CD48P09326 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
CD48P09326 COBL-210ENST00000632460 1941 ntTSL 5 BASIC19.59■□□□□ 0.73
CD48P09326 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CD48P09326 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CD48P09326 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CD48P09326 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CD48P09326 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CD48P09326 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CD48P09326 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
CD48P09326 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC19.59■□□□□ 0.73
CD48P09326 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CD48P09326 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC19.59■□□□□ 0.73
CD48P09326 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC19.59■□□□□ 0.73
CD48P09326 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CD48P09326 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC19.59■□□□□ 0.73
CD48P09326 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC19.59■□□□□ 0.73
CD48P09326 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CD48P09326 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC19.59■□□□□ 0.73
CD48P09326 KATNBL1P6-202ENST00000562413 1466 ntBASIC19.59■□□□□ 0.73
CD48P09326 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC19.59■□□□□ 0.73
CD48P09326 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC19.59■□□□□ 0.73
CD48P09326 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC19.59■□□□□ 0.73
CD48P09326 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CD48P09326 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CD48P09326 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CD48P09326 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
CD48P09326 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CD48P09326 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
CD48P09326 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
CD48P09326 AC005082.1-201ENST00000413042 2259 ntBASIC19.58■□□□□ 0.73
CD48P09326 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CD48P09326 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CD48P09326 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
CD48P09326 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
CD48P09326 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CD48P09326 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CD48P09326 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CD48P09326 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CD48P09326 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC19.58■□□□□ 0.72
CD48P09326 AC012618.2-201ENST00000428058 849 ntBASIC19.58■□□□□ 0.72
CD48P09326 NUDT16P1-203ENST00000513809 620 ntBASIC19.58■□□□□ 0.72
CD48P09326 PENK-204ENST00000518770 863 ntTSL 2 BASIC19.58■□□□□ 0.72
CD48P09326 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC19.58■□□□□ 0.72
CD48P09326 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC19.58■□□□□ 0.72
CD48P09326 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC19.58■□□□□ 0.72
CD48P09326 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC19.58■□□□□ 0.72
CD48P09326 AL049637.2-201ENST00000641778 930 ntBASIC19.58■□□□□ 0.72
CD48P09326 FSCN1P1-201ENST00000568912 1481 ntBASIC19.58■□□□□ 0.72
CD48P09326 HEIH-201ENST00000623091 1652 ntBASIC19.58■□□□□ 0.72
CD48P09326 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC19.58■□□□□ 0.72
CD48P09326 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC19.58■□□□□ 0.72
CD48P09326 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC19.58■□□□□ 0.72
CD48P09326 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
CD48P09326 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC19.58■□□□□ 0.72
CD48P09326 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC19.57■□□□□ 0.72
CD48P09326 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CD48P09326 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC19.57■□□□□ 0.72
CD48P09326 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
CD48P09326 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CD48P09326 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC19.57■□□□□ 0.72
CD48P09326 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CD48P09326 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CD48P09326 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC19.57■□□□□ 0.72
CD48P09326 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CD48P09326 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
CD48P09326 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC19.57■□□□□ 0.72
CD48P09326 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC19.57■□□□□ 0.72
CD48P09326 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC19.57■□□□□ 0.72
CD48P09326 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC19.57■□□□□ 0.72
CD48P09326 AP000692.2-201ENST00000608391 879 ntBASIC19.57■□□□□ 0.72
CD48P09326 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC19.57■□□□□ 0.72
CD48P09326 TMEM191A-211ENST00000637163 1067 ntBASIC19.57■□□□□ 0.72
CD48P09326 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CD48P09326 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CD48P09326 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC19.57■□□□□ 0.72
CD48P09326 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
CD48P09326 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CD48P09326 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CD48P09326 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC19.57■□□□□ 0.72
CD48P09326 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
CD48P09326 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
CD48P09326 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CD48P09326 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CD48P09326 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC19.57■□□□□ 0.72
CD48P09326 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CD48P09326 MTMR9LP-203ENST00000426597 1545 ntBASIC19.56■□□□□ 0.72
CD48P09326 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CD48P09326 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC19.56■□□□□ 0.72
CD48P09326 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CD48P09326 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.56■□□□□ 0.72
CD48P09326 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
CD48P09326 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CD48P09326 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC19.56■□□□□ 0.72
CD48P09326 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC19.56■□□□□ 0.72
CD48P09326 AC116562.2-201ENST00000507042 360 ntBASIC19.56■□□□□ 0.72
CD48P09326 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC19.56■□□□□ 0.72
CD48P09326 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms