Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HLA-DPB1P04440 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HLA-DPB1P04440 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
HLA-DPB1P04440 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC16.99■□□□□ 0.31
HLA-DPB1P04440 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
HLA-DPB1P04440 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HLA-DPB1P04440 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
HLA-DPB1P04440 MADD-208ENST00000405573 1823 ntTSL 5 BASIC16.99■□□□□ 0.31
HLA-DPB1P04440 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
HLA-DPB1P04440 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
HLA-DPB1P04440 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
HLA-DPB1P04440 RER1-204ENST00000378518 522 ntTSL 3 BASIC16.99■□□□□ 0.31
HLA-DPB1P04440 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC16.99■□□□□ 0.31
HLA-DPB1P04440 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC16.99■□□□□ 0.31
HLA-DPB1P04440 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC16.99■□□□□ 0.31
HLA-DPB1P04440 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
HLA-DPB1P04440 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HLA-DPB1P04440 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HLA-DPB1P04440 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC16.99■□□□□ 0.31
HLA-DPB1P04440 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC16.99■□□□□ 0.31
HLA-DPB1P04440 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HLA-DPB1P04440 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HLA-DPB1P04440 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HLA-DPB1P04440 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC16.99■□□□□ 0.31
HLA-DPB1P04440 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HLA-DPB1P04440 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HLA-DPB1P04440 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
HLA-DPB1P04440 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HLA-DPB1P04440 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC16.99■□□□□ 0.31
HLA-DPB1P04440 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.99■□□□□ 0.31
HLA-DPB1P04440 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC16.99■□□□□ 0.31
HLA-DPB1P04440 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HLA-DPB1P04440 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC16.99■□□□□ 0.31
HLA-DPB1P04440 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HLA-DPB1P04440 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
HLA-DPB1P04440 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC16.98■□□□□ 0.31
HLA-DPB1P04440 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC16.98■□□□□ 0.31
HLA-DPB1P04440 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
HLA-DPB1P04440 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
HLA-DPB1P04440 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
HLA-DPB1P04440 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
HLA-DPB1P04440 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HLA-DPB1P04440 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
HLA-DPB1P04440 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC16.98■□□□□ 0.31
HLA-DPB1P04440 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HLA-DPB1P04440 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HLA-DPB1P04440 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC16.98■□□□□ 0.31
HLA-DPB1P04440 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC16.98■□□□□ 0.31
HLA-DPB1P04440 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC16.98■□□□□ 0.31
HLA-DPB1P04440 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC16.98■□□□□ 0.31
HLA-DPB1P04440 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
HLA-DPB1P04440 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC16.98■□□□□ 0.31
HLA-DPB1P04440 OR2A1-AS1-207ENST00000486094 819 ntBASIC16.98■□□□□ 0.31
HLA-DPB1P04440 HES2-206ENST00000489730 730 ntTSL 2 BASIC16.98■□□□□ 0.31
HLA-DPB1P04440 SLC29A4P2-201ENST00000504749 1089 ntBASIC16.98■□□□□ 0.31
HLA-DPB1P04440 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HLA-DPB1P04440 KRT18P6-201ENST00000555540 1265 ntBASIC16.98■□□□□ 0.31
HLA-DPB1P04440 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
HLA-DPB1P04440 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HLA-DPB1P04440 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HLA-DPB1P04440 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC16.98■□□□□ 0.31
HLA-DPB1P04440 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
HLA-DPB1P04440 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HLA-DPB1P04440 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
HLA-DPB1P04440 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HLA-DPB1P04440 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
HLA-DPB1P04440 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC16.98■□□□□ 0.31
HLA-DPB1P04440 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC16.98■□□□□ 0.31
HLA-DPB1P04440 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
HLA-DPB1P04440 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
HLA-DPB1P04440 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
HLA-DPB1P04440 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
HLA-DPB1P04440 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC16.97■□□□□ 0.31
HLA-DPB1P04440 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
HLA-DPB1P04440 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
HLA-DPB1P04440 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HLA-DPB1P04440 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC16.97■□□□□ 0.31
HLA-DPB1P04440 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HLA-DPB1P04440 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HLA-DPB1P04440 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
HLA-DPB1P04440 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC16.97■□□□□ 0.31
HLA-DPB1P04440 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
HLA-DPB1P04440 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC16.97■□□□□ 0.31
HLA-DPB1P04440 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC16.97■□□□□ 0.31
HLA-DPB1P04440 DENND3-207ENST00000518347 850 ntTSL 2 BASIC16.97■□□□□ 0.31
HLA-DPB1P04440 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HLA-DPB1P04440 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC16.97■□□□□ 0.31
HLA-DPB1P04440 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC16.97■□□□□ 0.31
HLA-DPB1P04440 SOX15-203ENST00000570788 1093 ntBASIC16.97■□□□□ 0.31
HLA-DPB1P04440 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC16.97■□□□□ 0.31
HLA-DPB1P04440 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
HLA-DPB1P04440 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC16.97■□□□□ 0.31
HLA-DPB1P04440 AC124283.5-201ENST00000624661 1809 ntBASIC16.97■□□□□ 0.31
HLA-DPB1P04440 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
HLA-DPB1P04440 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
HLA-DPB1P04440 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC16.97■□□□□ 0.31
HLA-DPB1P04440 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HLA-DPB1P04440 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
HLA-DPB1P04440 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HLA-DPB1P04440 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms