Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 RPL18-209ENST00000550645 463 ntTSL 5 BASIC21.55■■□□□ 1.04
ALDH1A1P00352 RPL18-214ENST00000552588 559 ntTSL 3 BASIC21.55■■□□□ 1.04
ALDH1A1P00352 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC21.55■■□□□ 1.04
ALDH1A1P00352 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC21.55■■□□□ 1.04
ALDH1A1P00352 AP005901.3-202ENST00000581653 237 ntBASIC21.55■■□□□ 1.04
ALDH1A1P00352 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC21.55■■□□□ 1.04
ALDH1A1P00352 AL691403.2-201ENST00000618460 490 ntBASIC21.55■■□□□ 1.04
ALDH1A1P00352 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
ALDH1A1P00352 AC148477.8-201ENST00000624298 468 ntBASIC21.55■■□□□ 1.04
ALDH1A1P00352 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC21.55■■□□□ 1.04
ALDH1A1P00352 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
ALDH1A1P00352 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
ALDH1A1P00352 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC21.55■■□□□ 1.04
ALDH1A1P00352 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ALDH1A1P00352 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
ALDH1A1P00352 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
ALDH1A1P00352 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
ALDH1A1P00352 HMGN1P19-201ENST00000436976 333 ntBASIC21.54■■□□□ 1.04
ALDH1A1P00352 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC21.54■■□□□ 1.04
ALDH1A1P00352 TEN1-204ENST00000588202 862 ntTSL 3 BASIC21.54■■□□□ 1.04
ALDH1A1P00352 AC024563.2-201ENST00000603282 481 ntBASIC21.54■■□□□ 1.04
ALDH1A1P00352 PRKN-208ENST00000610470 531 ntTSL 2 BASIC21.54■■□□□ 1.04
ALDH1A1P00352 PRKN-209ENST00000612485 225 ntTSL 5 BASIC21.54■■□□□ 1.04
ALDH1A1P00352 HOTTIP_1.1-201ENST00000620415 57 ntBASIC21.54■■□□□ 1.04
ALDH1A1P00352 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
ALDH1A1P00352 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
ALDH1A1P00352 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC21.54■■□□□ 1.04
ALDH1A1P00352 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC21.53■■□□□ 1.04
ALDH1A1P00352 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
ALDH1A1P00352 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
ALDH1A1P00352 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC21.53■■□□□ 1.04
ALDH1A1P00352 AL691432.2-201ENST00000607222 2038 ntBASIC21.53■■□□□ 1.04
ALDH1A1P00352 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ALDH1A1P00352 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ALDH1A1P00352 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
ALDH1A1P00352 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
ALDH1A1P00352 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC21.53■■□□□ 1.04
ALDH1A1P00352 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC21.53■■□□□ 1.04
ALDH1A1P00352 AC018712.1-201ENST00000455767 687 ntBASIC21.53■■□□□ 1.04
ALDH1A1P00352 LITAF-211ENST00000572255 516 ntTSL 4 BASIC21.53■■□□□ 1.04
ALDH1A1P00352 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC21.53■■□□□ 1.04
ALDH1A1P00352 MIR5100-201ENST00000579544 119 ntBASIC21.53■■□□□ 1.04
ALDH1A1P00352 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC21.53■■□□□ 1.04
ALDH1A1P00352 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC21.53■■□□□ 1.04
ALDH1A1P00352 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
ALDH1A1P00352 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC21.53■■□□□ 1.04
ALDH1A1P00352 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC21.53■■□□□ 1.04
ALDH1A1P00352 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC21.53■■□□□ 1.04
ALDH1A1P00352 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
ALDH1A1P00352 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
ALDH1A1P00352 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ALDH1A1P00352 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ALDH1A1P00352 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC21.52■■□□□ 1.04
ALDH1A1P00352 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ALDH1A1P00352 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
ALDH1A1P00352 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ALDH1A1P00352 GGCT-205ENST00000409436 954 ntTSL 3 BASIC21.52■■□□□ 1.04
ALDH1A1P00352 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC21.52■■□□□ 1.04
ALDH1A1P00352 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC21.52■■□□□ 1.04
ALDH1A1P00352 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC21.52■■□□□ 1.04
ALDH1A1P00352 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
ALDH1A1P00352 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC21.52■■□□□ 1.04
ALDH1A1P00352 AC133561.1-201ENST00000568600 2415 ntBASIC21.52■■□□□ 1.04
ALDH1A1P00352 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
ALDH1A1P00352 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC21.52■■□□□ 1.04
ALDH1A1P00352 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
ALDH1A1P00352 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
ALDH1A1P00352 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC21.52■■□□□ 1.04
ALDH1A1P00352 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC21.52■■□□□ 1.04
ALDH1A1P00352 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.03
ALDH1A1P00352 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC21.52■■□□□ 1.03
ALDH1A1P00352 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.03
ALDH1A1P00352 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.03
ALDH1A1P00352 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ALDH1A1P00352 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ALDH1A1P00352 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ALDH1A1P00352 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
ALDH1A1P00352 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC21.51■■□□□ 1.03
ALDH1A1P00352 AC073648.2-201ENST00000510116 352 ntBASIC21.51■■□□□ 1.03
ALDH1A1P00352 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC21.51■■□□□ 1.03
ALDH1A1P00352 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC21.51■■□□□ 1.03
ALDH1A1P00352 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC21.51■■□□□ 1.03
ALDH1A1P00352 AC008608.2-201ENST00000606089 416 ntBASIC21.51■■□□□ 1.03
ALDH1A1P00352 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC21.51■■□□□ 1.03
ALDH1A1P00352 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC21.51■■□□□ 1.03
ALDH1A1P00352 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ALDH1A1P00352 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
ALDH1A1P00352 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ALDH1A1P00352 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC21.51■■□□□ 1.03
ALDH1A1P00352 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
ALDH1A1P00352 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
ALDH1A1P00352 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC21.51■■□□□ 1.03
ALDH1A1P00352 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ALDH1A1P00352 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
ALDH1A1P00352 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ALDH1A1P00352 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ALDH1A1P00352 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
ALDH1A1P00352 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
ALDH1A1P00352 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ALDH1A1P00352 RPS2P28-201ENST00000314255 741 ntBASIC21.5■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms