Protein–RNA interactions for Protein: O75508

CLDN11, Claudin-11, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11O75508 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLDN11O75508 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC19.3■□□□□ 0.68
CLDN11O75508 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC19.3■□□□□ 0.68
CLDN11O75508 MIR3180-5-201ENST00000583743 153 ntBASIC19.3■□□□□ 0.68
CLDN11O75508 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC19.3■□□□□ 0.68
CLDN11O75508 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLDN11O75508 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19.3■□□□□ 0.68
CLDN11O75508 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLDN11O75508 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CLDN11O75508 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
CLDN11O75508 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLDN11O75508 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CLDN11O75508 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC19.3■□□□□ 0.68
CLDN11O75508 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
CLDN11O75508 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLDN11O75508 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC19.29■□□□□ 0.68
CLDN11O75508 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC19.29■□□□□ 0.68
CLDN11O75508 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CLDN11O75508 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.29■□□□□ 0.68
CLDN11O75508 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLDN11O75508 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLDN11O75508 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
CLDN11O75508 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CLDN11O75508 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLDN11O75508 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLDN11O75508 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLDN11O75508 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLDN11O75508 ILF2-202ENST00000368681 726 ntTSL 2 BASIC19.29■□□□□ 0.68
CLDN11O75508 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC19.29■□□□□ 0.68
CLDN11O75508 AP000523.1-201ENST00000398242 1049 ntBASIC19.29■□□□□ 0.68
CLDN11O75508 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
CLDN11O75508 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLDN11O75508 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC19.29■□□□□ 0.68
CLDN11O75508 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
CLDN11O75508 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CLDN11O75508 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC19.29■□□□□ 0.68
CLDN11O75508 NEK4P2-201ENST00000580004 1012 ntBASIC19.29■□□□□ 0.68
CLDN11O75508 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
CLDN11O75508 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
CLDN11O75508 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC19.29■□□□□ 0.68
CLDN11O75508 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CLDN11O75508 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLDN11O75508 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLDN11O75508 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLDN11O75508 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.28■□□□□ 0.68
CLDN11O75508 AL049812.1-201ENST00000432563 2267 ntBASIC19.28■□□□□ 0.68
CLDN11O75508 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CLDN11O75508 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CLDN11O75508 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CLDN11O75508 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLDN11O75508 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLDN11O75508 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLDN11O75508 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLDN11O75508 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CLDN11O75508 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CLDN11O75508 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
CLDN11O75508 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
CLDN11O75508 COX11P1-201ENST00000489116 835 ntBASIC19.28■□□□□ 0.68
CLDN11O75508 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC19.28■□□□□ 0.68
CLDN11O75508 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC19.28■□□□□ 0.68
CLDN11O75508 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC19.28■□□□□ 0.68
CLDN11O75508 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC19.28■□□□□ 0.68
CLDN11O75508 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC19.28■□□□□ 0.68
CLDN11O75508 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC19.28■□□□□ 0.68
CLDN11O75508 RBM42-202ENST00000586618 771 ntTSL 3 BASIC19.28■□□□□ 0.68
CLDN11O75508 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC19.28■□□□□ 0.68
CLDN11O75508 AL031432.5-201ENST00000641059 760 ntBASIC19.28■□□□□ 0.68
CLDN11O75508 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CLDN11O75508 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLDN11O75508 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
CLDN11O75508 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.28■□□□□ 0.68
CLDN11O75508 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CLDN11O75508 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLDN11O75508 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CLDN11O75508 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
CLDN11O75508 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLDN11O75508 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
CLDN11O75508 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC19.27■□□□□ 0.68
CLDN11O75508 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC19.27■□□□□ 0.68
CLDN11O75508 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CLDN11O75508 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CLDN11O75508 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC19.27■□□□□ 0.68
CLDN11O75508 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CLDN11O75508 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC19.27■□□□□ 0.68
CLDN11O75508 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CLDN11O75508 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC19.27■□□□□ 0.68
CLDN11O75508 CD70-202ENST00000423145 881 ntTSL 2 BASIC19.27■□□□□ 0.68
CLDN11O75508 AC009947.2-201ENST00000444014 672 ntBASIC19.27■□□□□ 0.68
CLDN11O75508 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
CLDN11O75508 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC19.27■□□□□ 0.68
CLDN11O75508 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CLDN11O75508 AC068587.9-201ENST00000641814 219 ntBASIC19.27■□□□□ 0.68
CLDN11O75508 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CLDN11O75508 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC19.27■□□□□ 0.68
CLDN11O75508 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
CLDN11O75508 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CLDN11O75508 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC19.27■□□□□ 0.67
CLDN11O75508 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CLDN11O75508 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
CLDN11O75508 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms