Protein–RNA interactions for Protein: O60662

KLHL41, Kelch-like protein 41, humanhuman

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL41O60662 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
KLHL41O60662 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
KLHL41O60662 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.76■□□□□ 0.59
KLHL41O60662 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.76■□□□□ 0.59
KLHL41O60662 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
KLHL41O60662 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
KLHL41O60662 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
KLHL41O60662 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC18.76■□□□□ 0.59
KLHL41O60662 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
KLHL41O60662 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
KLHL41O60662 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
KLHL41O60662 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
KLHL41O60662 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
KLHL41O60662 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
KLHL41O60662 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
KLHL41O60662 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC18.75■□□□□ 0.59
KLHL41O60662 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
KLHL41O60662 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.75■□□□□ 0.59
KLHL41O60662 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
KLHL41O60662 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
KLHL41O60662 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
KLHL41O60662 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
KLHL41O60662 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
KLHL41O60662 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
KLHL41O60662 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC18.75■□□□□ 0.59
KLHL41O60662 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC18.75■□□□□ 0.59
KLHL41O60662 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC18.75■□□□□ 0.59
KLHL41O60662 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC18.75■□□□□ 0.59
KLHL41O60662 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC18.75■□□□□ 0.59
KLHL41O60662 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
KLHL41O60662 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
KLHL41O60662 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
KLHL41O60662 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
KLHL41O60662 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.75■□□□□ 0.59
KLHL41O60662 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC18.75■□□□□ 0.59
KLHL41O60662 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
KLHL41O60662 AC093525.10-201ENST00000625130 1569 ntBASIC18.75■□□□□ 0.59
KLHL41O60662 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.75■□□□□ 0.59
KLHL41O60662 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.75■□□□□ 0.59
KLHL41O60662 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
KLHL41O60662 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.75■□□□□ 0.59
KLHL41O60662 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
KLHL41O60662 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC18.74■□□□□ 0.59
KLHL41O60662 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
KLHL41O60662 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
KLHL41O60662 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
KLHL41O60662 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
KLHL41O60662 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
KLHL41O60662 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.74■□□□□ 0.59
KLHL41O60662 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.74■□□□□ 0.59
KLHL41O60662 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
KLHL41O60662 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
KLHL41O60662 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
KLHL41O60662 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
KLHL41O60662 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC18.74■□□□□ 0.59
KLHL41O60662 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
KLHL41O60662 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC18.74■□□□□ 0.59
KLHL41O60662 SERP1-205ENST00000487153 657 ntTSL 4 BASIC18.74■□□□□ 0.59
KLHL41O60662 LY6E-205ENST00000519611 635 ntTSL 3 BASIC18.74■□□□□ 0.59
KLHL41O60662 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
KLHL41O60662 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC18.74■□□□□ 0.59
KLHL41O60662 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC18.74■□□□□ 0.59
KLHL41O60662 AC233702.5-201ENST00000584107 538 ntBASIC18.74■□□□□ 0.59
KLHL41O60662 Z99916.2-201ENST00000604037 246 ntBASIC18.74■□□□□ 0.59
KLHL41O60662 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
KLHL41O60662 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
KLHL41O60662 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
KLHL41O60662 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
KLHL41O60662 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
KLHL41O60662 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
KLHL41O60662 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
KLHL41O60662 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
KLHL41O60662 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
KLHL41O60662 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC18.74■□□□□ 0.59
KLHL41O60662 AL512353.2-201ENST00000448759 1962 ntBASIC18.73■□□□□ 0.59
KLHL41O60662 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
KLHL41O60662 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
KLHL41O60662 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.73■□□□□ 0.59
KLHL41O60662 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
KLHL41O60662 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
KLHL41O60662 TFP1-202ENST00000475455 1573 ntBASIC18.73■□□□□ 0.59
KLHL41O60662 SDHAP1-207ENST00000440850 2000 ntBASIC18.73■□□□□ 0.59
KLHL41O60662 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
KLHL41O60662 CALM3-202ENST00000391918 702 ntTSL 2 BASIC18.73■□□□□ 0.59
KLHL41O60662 RPS2P55-201ENST00000397318 883 ntBASIC18.73■□□□□ 0.59
KLHL41O60662 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
KLHL41O60662 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
KLHL41O60662 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC18.73■□□□□ 0.59
KLHL41O60662 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC18.73■□□□□ 0.59
KLHL41O60662 AC107956.1-201ENST00000494359 873 ntBASIC18.73■□□□□ 0.59
KLHL41O60662 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC18.73■□□□□ 0.59
KLHL41O60662 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
KLHL41O60662 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
KLHL41O60662 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
KLHL41O60662 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
KLHL41O60662 MOK-233ENST00000524214 1539 ntTSL 2 BASIC18.73■□□□□ 0.59
KLHL41O60662 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
KLHL41O60662 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
KLHL41O60662 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.73■□□□□ 0.59
KLHL41O60662 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms