Protein–RNA interactions for Protein: O60637

TSPAN3, Tetraspanin-3, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3O60637 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TSPAN3O60637 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.47■□□□□ 0.71
TSPAN3O60637 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TSPAN3O60637 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.47■□□□□ 0.71
TSPAN3O60637 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC19.47■□□□□ 0.71
TSPAN3O60637 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
TSPAN3O60637 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
TSPAN3O60637 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TSPAN3O60637 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.47■□□□□ 0.71
TSPAN3O60637 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
TSPAN3O60637 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TSPAN3O60637 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
TSPAN3O60637 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TSPAN3O60637 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TSPAN3O60637 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC19.47■□□□□ 0.71
TSPAN3O60637 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
TSPAN3O60637 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TSPAN3O60637 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TSPAN3O60637 UBQLN4P1-201ENST00000461599 1801 ntBASIC19.46■□□□□ 0.71
TSPAN3O60637 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC19.46■□□□□ 0.71
TSPAN3O60637 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TSPAN3O60637 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TSPAN3O60637 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.46■□□□□ 0.71
TSPAN3O60637 AC120498.9-201ENST00000339021 3867 ntBASIC19.46■□□□□ 0.71
TSPAN3O60637 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC19.46■□□□□ 0.71
TSPAN3O60637 FEM1AP3-201ENST00000403722 1741 ntBASIC19.46■□□□□ 0.71
TSPAN3O60637 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC19.46■□□□□ 0.71
TSPAN3O60637 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
TSPAN3O60637 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC19.46■□□□□ 0.71
TSPAN3O60637 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC19.46■□□□□ 0.71
TSPAN3O60637 AL023284.2-201ENST00000405850 579 ntBASIC19.46■□□□□ 0.71
TSPAN3O60637 PHB2-202ENST00000440277 996 ntTSL 5 BASIC19.46■□□□□ 0.71
TSPAN3O60637 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TSPAN3O60637 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC19.46■□□□□ 0.71
TSPAN3O60637 AC140113.3-201ENST00000605663 199 ntBASIC19.46■□□□□ 0.71
TSPAN3O60637 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC19.46■□□□□ 0.71
TSPAN3O60637 CR769767.2-201ENST00000622735 460 ntBASIC19.46■□□□□ 0.71
TSPAN3O60637 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TSPAN3O60637 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TSPAN3O60637 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TSPAN3O60637 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
TSPAN3O60637 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TSPAN3O60637 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TSPAN3O60637 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.46■□□□□ 0.71
TSPAN3O60637 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
TSPAN3O60637 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC19.46■□□□□ 0.71
TSPAN3O60637 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
TSPAN3O60637 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TSPAN3O60637 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
TSPAN3O60637 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TSPAN3O60637 AC116562.4-201ENST00000641316 2276 ntBASIC19.45■□□□□ 0.7
TSPAN3O60637 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TSPAN3O60637 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TSPAN3O60637 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.45■□□□□ 0.7
TSPAN3O60637 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TSPAN3O60637 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
TSPAN3O60637 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
TSPAN3O60637 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
TSPAN3O60637 RNF152P1-201ENST00000397754 604 ntBASIC19.45■□□□□ 0.7
TSPAN3O60637 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TSPAN3O60637 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC19.45■□□□□ 0.7
TSPAN3O60637 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC19.45■□□□□ 0.7
TSPAN3O60637 CBFB-203ENST00000561924 584 ntTSL 5 BASIC19.45■□□□□ 0.7
TSPAN3O60637 NT5C-210ENST00000582160 860 ntTSL 2 BASIC19.45■□□□□ 0.7
TSPAN3O60637 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC19.45■□□□□ 0.7
TSPAN3O60637 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC19.45■□□□□ 0.7
TSPAN3O60637 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TSPAN3O60637 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TSPAN3O60637 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TSPAN3O60637 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TSPAN3O60637 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TSPAN3O60637 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TSPAN3O60637 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC19.45■□□□□ 0.7
TSPAN3O60637 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TSPAN3O60637 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
TSPAN3O60637 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TSPAN3O60637 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC19.44■□□□□ 0.7
TSPAN3O60637 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TSPAN3O60637 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC19.44■□□□□ 0.7
TSPAN3O60637 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TSPAN3O60637 KRT8P3-201ENST00000519669 1449 ntBASIC19.44■□□□□ 0.7
TSPAN3O60637 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.44■□□□□ 0.7
TSPAN3O60637 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.44■□□□□ 0.7
TSPAN3O60637 ANKRD20A18P-201ENST00000359341 492 ntBASIC19.44■□□□□ 0.7
TSPAN3O60637 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC19.44■□□□□ 0.7
TSPAN3O60637 TPM1-226ENST00000560959 925 ntTSL 2 BASIC19.44■□□□□ 0.7
TSPAN3O60637 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC19.44■□□□□ 0.7
TSPAN3O60637 RMI2-205ENST00000576027 818 ntTSL 2 BASIC19.44■□□□□ 0.7
TSPAN3O60637 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TSPAN3O60637 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
TSPAN3O60637 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TSPAN3O60637 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TSPAN3O60637 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TSPAN3O60637 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TSPAN3O60637 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TSPAN3O60637 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
TSPAN3O60637 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
TSPAN3O60637 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC19.44■□□□□ 0.7
TSPAN3O60637 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
TSPAN3O60637 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms