Protein–RNA interactions for Protein: O60391

GRIN3B, Glutamate receptor ionotropic, NMDA 3B, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3BO60391 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC23.05■■□□□ 1.28
GRIN3BO60391 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC23.05■■□□□ 1.28
GRIN3BO60391 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC23.05■■□□□ 1.28
GRIN3BO60391 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
GRIN3BO60391 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
GRIN3BO60391 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
GRIN3BO60391 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC23.05■■□□□ 1.28
GRIN3BO60391 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
GRIN3BO60391 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
GRIN3BO60391 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
GRIN3BO60391 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
GRIN3BO60391 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
GRIN3BO60391 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
GRIN3BO60391 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC23.04■■□□□ 1.28
GRIN3BO60391 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC23.04■■□□□ 1.28
GRIN3BO60391 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC23.04■■□□□ 1.28
GRIN3BO60391 AC211486.1-202ENST00000416371 468 ntBASIC23.04■■□□□ 1.28
GRIN3BO60391 AP006288.1-201ENST00000446065 395 ntBASIC23.04■■□□□ 1.28
GRIN3BO60391 AC211476.1-201ENST00000503899 468 ntBASIC23.04■■□□□ 1.28
GRIN3BO60391 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC23.04■■□□□ 1.28
GRIN3BO60391 BNIP3P18-201ENST00000593976 575 ntBASIC23.04■■□□□ 1.28
GRIN3BO60391 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC23.04■■□□□ 1.28
GRIN3BO60391 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
GRIN3BO60391 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
GRIN3BO60391 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC23.04■■□□□ 1.28
GRIN3BO60391 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC23.03■■□□□ 1.28
GRIN3BO60391 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC23.03■■□□□ 1.28
GRIN3BO60391 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
GRIN3BO60391 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
GRIN3BO60391 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC23.03■■□□□ 1.28
GRIN3BO60391 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
GRIN3BO60391 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
GRIN3BO60391 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
GRIN3BO60391 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
GRIN3BO60391 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC23.03■■□□□ 1.28
GRIN3BO60391 CLDN5-201ENST00000403084 2357 ntBASIC23.03■■□□□ 1.28
GRIN3BO60391 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC23.02■■□□□ 1.28
GRIN3BO60391 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
GRIN3BO60391 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC23.02■■□□□ 1.28
GRIN3BO60391 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
GRIN3BO60391 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
GRIN3BO60391 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
GRIN3BO60391 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
GRIN3BO60391 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC23.02■■□□□ 1.28
GRIN3BO60391 FGFR3P6-201ENST00000457012 610 ntBASIC23.02■■□□□ 1.28
GRIN3BO60391 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC23.02■■□□□ 1.28
GRIN3BO60391 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC23.02■■□□□ 1.28
GRIN3BO60391 AC114341.1-201ENST00000618070 349 ntBASIC23.02■■□□□ 1.28
GRIN3BO60391 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC23.02■■□□□ 1.28
GRIN3BO60391 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC23.02■■□□□ 1.28
GRIN3BO60391 AC092720.2-201ENST00000602388 1665 ntBASIC23.02■■□□□ 1.28
GRIN3BO60391 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
GRIN3BO60391 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
GRIN3BO60391 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC23.02■■□□□ 1.28
GRIN3BO60391 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
GRIN3BO60391 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC23.02■■□□□ 1.28
GRIN3BO60391 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC23.02■■□□□ 1.28
GRIN3BO60391 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
GRIN3BO60391 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.27
GRIN3BO60391 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.27
GRIN3BO60391 PLK5-205ENST00000642079 1969 ntBASIC23.01■■□□□ 1.27
GRIN3BO60391 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
GRIN3BO60391 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
GRIN3BO60391 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
GRIN3BO60391 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
GRIN3BO60391 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC23.01■■□□□ 1.27
GRIN3BO60391 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
GRIN3BO60391 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
GRIN3BO60391 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC23.01■■□□□ 1.27
GRIN3BO60391 RBM17P3-201ENST00000417687 1192 ntBASIC23.01■■□□□ 1.27
GRIN3BO60391 COX20P2-201ENST00000452636 358 ntBASIC23.01■■□□□ 1.27
GRIN3BO60391 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC23.01■■□□□ 1.27
GRIN3BO60391 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
GRIN3BO60391 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC23.01■■□□□ 1.27
GRIN3BO60391 AC010240.3-201ENST00000607688 395 ntBASIC23.01■■□□□ 1.27
GRIN3BO60391 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
GRIN3BO60391 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC23.01■■□□□ 1.27
GRIN3BO60391 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
GRIN3BO60391 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
GRIN3BO60391 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC23.01■■□□□ 1.27
GRIN3BO60391 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC23.01■■□□□ 1.27
GRIN3BO60391 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
GRIN3BO60391 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC23■■□□□ 1.27
GRIN3BO60391 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC23■■□□□ 1.27
GRIN3BO60391 KRT8P7-201ENST00000533003 1432 ntBASIC23■■□□□ 1.27
GRIN3BO60391 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC23■■□□□ 1.27
GRIN3BO60391 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
GRIN3BO60391 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
GRIN3BO60391 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
GRIN3BO60391 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC23■■□□□ 1.27
GRIN3BO60391 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
GRIN3BO60391 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
GRIN3BO60391 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC23■■□□□ 1.27
GRIN3BO60391 Z83851.2-201ENST00000609564 659 ntBASIC23■■□□□ 1.27
GRIN3BO60391 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
GRIN3BO60391 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC23■■□□□ 1.27
GRIN3BO60391 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC23■■□□□ 1.27
GRIN3BO60391 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC23■■□□□ 1.27
GRIN3BO60391 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC23■■□□□ 1.27
GRIN3BO60391 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms